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SCNpilot_cont_1000_bf_scaffold_492_curated

Search features with annotation key words

Displaying items 31-58 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_492_curated_31
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30775..31926)
DNA (1152bp) protein (384aa)
UPI0003CEBFB5 related cluster n=1 Tax=unknown RepID=UPI0003CEBFB5
Diguanylate cyclase {ECO:0000313|EMBL:ESY73044.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_492_curated_32
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32034..32837)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000362BC16
Uncharacterized protein {ECO:0000313|EMBL:CDX49582.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_492_curated_33
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32865..33335)
DNA (471bp) protein (157aa)
Putative acetyltransferase n=1 Tax=Mesorhizobium metallidurans STM 2683 RepID=M5F5C8_9RHIZ
GCN5-like N-acetyltransferase {ECO:0000313|EMBL:CDX26082.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
acetyltransferase
SCNpilot_cont_1000_bf_scaffold_492_curated_34
unknown

Not on your lists

comp(33332..33658)
DNA (327bp) protein (109aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_492_curated_35
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33670..34086)
DNA (417bp) protein (139aa)
UPI0003CEE9CB related cluster n=1 Tax=unknown RepID=UPI0003CEE9CB
Uncharacterized protein {ECO:0000313|EMBL:CDX36563.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
crcB family protein
SCNpilot_cont_1000_bf_scaffold_492_curated_36
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34083..34523)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. AP16 RepID=J2DBJ6_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJK87279.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_492_curated_37
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34528..37449)
DNA (2922bp) protein (974aa)
UvrABC system protein A n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y9A8_9RHIZ
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
excinuclease ABC subunit A; K03701 excinuclease ABC subunit A
SCNpilot_cont_1000_bf_scaffold_492_curated_38
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37633..38805)
DNA (1173bp) protein (391aa)
DNA-binding protein with HTH domain containing protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2W4J1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KKB12438.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
two-component response regulator protein
SCNpilot_cont_1000_bf_scaffold_492_curated_39
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38913..39473
DNA (561bp) protein (187aa)
Uncharacterized protein n=2 Tax=Legionella pneumophila RepID=A5IG63_LEGPC
hypothetical protein
Putative conserved protein {ECO:0000313|EMBL:ADG24179.1}; TaxID=423212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumophila serogroup 1 (strain 2300/99 Alcoy).;"
SCNpilot_cont_1000_bf_scaffold_492_curated_40
unknown

Not on your lists

39504..39854
DNA (351bp) protein (117aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_492_curated_41
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40431..43292)
DNA (2862bp) protein (954aa)
Peptidase C14 caspase catalytic subunit p20 n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EIJ3_METSB
peptidase C14 caspase catalytic subunit p20
Peptidase C14 caspase catalytic subunit p20 {ECO:0000313|EMBL:ACK51312.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
SCNpilot_cont_1000_bf_scaffold_492_curated_42
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(43319..45715)
DNA (2397bp) protein (799aa)
peptidase C14 n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000374E3F2
peptidase C14 caspase catalytic subunit p20
Peptidase C14 caspase catalytic subunit p20 {ECO:0000313|EMBL:ACA20918.1}; Flags: Precursor;; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
SCNpilot_cont_1000_bf_scaffold_492_curated_43
Rhodomicrobium vannielii, Rhodomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(45752..46300)
DNA (549bp) protein (183aa)
OmpA/MotB domain protein n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I7A1_RHOVT
OmpA/MotB domain-containing protein
OmpA/MotB domain protein {ECO:0000313|EMBL:ADP70752.1}; TaxID=648757 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Rhodomicrobium.;" source="Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 /; LMG 4299).;"
SCNpilot_cont_1000_bf_scaffold_492_curated_44
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(46303..47835)
DNA (1533bp) protein (511aa)
Cysteine protease n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NYL9_9RHOB
Cysteine protease {ECO:0000313|EMBL:EAV42215.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
cysteine protease
SCNpilot_cont_1000_bf_scaffold_492_curated_45
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48102..48350)
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y9A9_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CDX19674.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_492_curated_46
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48454..49059)
DNA (606bp) protein (202aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
endopeptidase Clp (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y9B0_9RHIZ
SCNpilot_cont_1000_bf_scaffold_492_curated_47
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49079..49555)
DNA (477bp) protein (159aa)
UPI0003CDF95E related cluster n=1 Tax=unknown RepID=UPI0003CDF95E
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:CDX49571.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Activator of Hsp90 ATPase 1 family protein
SCNpilot_cont_1000_bf_scaffold_492_curated_48
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(49552..49866)
DNA (315bp) protein (105aa)
Transcriptional regulator n=1 Tax=Mesorhizobium sp. STM 4661 RepID=M5FL99_9RHIZ
ArsR family transcription regulator {ECO:0000313|EMBL:CDX19681.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_492_curated_49
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50104..50628
DNA (525bp) protein (175aa)
Single-stranded DNA-binding protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y9B4_9RHIZ
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
single-strand DNA-binding protein; K03111 single-strand DNA-binding protein
SCNpilot_cont_1000_bf_scaffold_492_curated_50
Mesorhizobium sp. LSJC285A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

50714..51103
DNA (390bp) protein (130aa)
UPI0003CF3C03 related cluster n=1 Tax=unknown RepID=UPI0003CF3C03
Membrane protein {ECO:0000313|EMBL:ESW79054.1}; TaxID=1287338 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC285A00.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_492_curated_51
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51142..51567
DNA (426bp) protein (142aa)
UPI0003CEDE41 related cluster n=1 Tax=unknown RepID=UPI0003CEDE41
Uncharacterized protein {ECO:0000313|EMBL:CDX19688.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
OsmC family protein; K07397 putative redox protein
SCNpilot_cont_1000_bf_scaffold_492_curated_52
Mesorhizobium sp. LNHC209A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(51629..52258)
DNA (630bp) protein (210aa)
UPI0003D03BFE related cluster n=1 Tax=unknown RepID=UPI0003D03BFE
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1287226 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC209A00.;"
hypothetical protein; K05595 multiple antibiotic resistance protein rbh
SCNpilot_cont_1000_bf_scaffold_492_curated_53
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52376..52996)
DNA (621bp) protein (207aa)
Mlr0735 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98M47_RHILO
Uncharacterized protein {ECO:0000313|EMBL:CDX38876.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
hypothetical protein rbh
SCNpilot_cont_1000_bf_scaffold_492_curated_54
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(52993..54663)
DNA (1671bp) protein (557aa)
Probable sulfate transporter n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98M48_RHILO
Putative sulfate transporter {ECO:0000313|EMBL:CDX19704.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
sulfate transporter rbh
SCNpilot_cont_1000_bf_scaffold_492_curated_55
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


54890..57673
DNA (2784bp) protein (928aa)
DNA gyrase subunit A; K02469 DNA gyrase subunit A [EC:5.99.1.3] rbh
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
DNA gyrase subunit A n=2 Tax=Mesorhizobium ciceri RepID=E8TB11_MESCW
SCNpilot_cont_1000_bf_scaffold_492_curated_56
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57746..57898)
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TB10_MESCW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV13164.1}; Flags: Precursor;; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_1000_bf_scaffold_492_curated_57
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58066..58593
DNA (528bp) protein (176aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
Phosphopantetheine adenylyltransferase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y9C9_9RHIZ
SCNpilot_cont_1000_bf_scaffold_492_curated_58
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58657..58896
DNA (240bp) protein (80aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y9D0_9RHIZ
cyclophilin type peptidyl-prolyl cis-trans isomerase
Displaying items 31-58 of 58 in total

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