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SCNpilot_cont_1000_bf_scaffold_77_curated

Search features with annotation key words

Displaying items 61-90 of 213 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_77_curated_61
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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65145..65564
DNA (420bp) protein (140aa)
Dopa 45-dioxygenase; K10253 DOPA 4,5-dioxygenase [EC:1.14.99.-]
UPI0003CEF893 related cluster n=1 Tax=unknown RepID=UPI0003CEF893
Dopa 45-dioxygenase {ECO:0000313|EMBL:ESY66837.1}; TaxID=1287243 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
SCNpilot_cont_1000_bf_scaffold_77_curated_62
Mesorhizobium sp. LNJC394B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

65655..66644
DNA (990bp) protein (330aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7G9W0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESY25738.1}; TaxID=1287274 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC394B00.;"
putative fucosyltransferase
SCNpilot_cont_1000_bf_scaffold_77_curated_63
Pseudomonas resinovorans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66684..67823)
DNA (1140bp) protein (380aa)
Putative oxidoreductase n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6ADG5_PSERE
putative oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:BAN47257.1}; TaxID=1245471 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas resinovorans NBRC 106553.;"
SCNpilot_cont_1000_bf_scaffold_77_curated_64
Roseivivax isoporae, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67879..68613)
DNA (735bp) protein (245aa)
amino acid ABC transporter ATPase n=1 Tax=Aquaspirillum serpens RepID=UPI0003B5FA3C
Amino acid ABC transporter ATPase {ECO:0000313|EMBL:ETX29195.1}; TaxID=1449351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseivivax.;" source="Roseivivax isoporae LMG 25204.;"
livF; branched-chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_1000_bf_scaffold_77_curated_65
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68610..69329)
DNA (720bp) protein (240aa)
Uncharacterized protein {ECO:0000313|EMBL:KGF70831.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
Putative branched-chain amino acid ABC transporter, permease protein id=2902208 bin=GWC2_Methylomirabilis_70_16 species=Bordetella avium genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative branched-chain amino acid ABC transporter, ATP-binding component (livG-like); K01995 branched-chain amino acid transport system ATP-binding protein
SCNpilot_cont_1000_bf_scaffold_77_curated_66
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69326..70234)
DNA (909bp) protein (303aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM47210.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22II-S11g.;"
ABC transporter integral membrane subunit; K01998 branched-chain amino acid transport system permease protein id=14625355 bin=bin7_NC10_sister species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=bin7_NC10_sister organism_group=NC10
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
SCNpilot_cont_1000_bf_scaffold_77_curated_67
Roseivivax isoporae, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70231..71109)
DNA (879bp) protein (293aa)
High-affinity branched-chain amino acid transport system permease protein livh n=1 Tax=Acidovorax sp. KKS102 RepID=K0I7G5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ETX29288.1}; TaxID=1449351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseivivax.;" source="Roseivivax isoporae LMG 25204.;"
High-affinity branched-chain amino acid transporter permease LivH
SCNpilot_cont_1000_bf_scaffold_77_curated_68
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71156..72340)
DNA (1185bp) protein (395aa)
Uncharacterized protein {ECO:0000313|EMBL:KGM47208.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22II-S11g.;"
ABC-type branched-chain amino acid transport system, periplasmic component id=2247798 bin=GWA2_Methylomirabilis_73_35 species=Hylemonella gracilis genus=Hylemonella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched-chain amino acid ABC transporter substrate-binding protein
SCNpilot_cont_1000_bf_scaffold_77_curated_69
Roseivivax isoporae, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72661..73257)
DNA (597bp) protein (199aa)
Transcriptional regulator n=2 Tax=Pandoraea RepID=V5UAD2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ETX29286.1}; TaxID=1449351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseivivax.;" source="Roseivivax isoporae LMG 25204.;"
TetR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_77_curated_70
Pseudomonas resinovorans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

73520..74305
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6ANS1_PSERE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN47258.1}; TaxID=1245471 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas resinovorans NBRC 106553.;"
SCNpilot_cont_1000_bf_scaffold_77_curated_71
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74497..75114)
DNA (618bp) protein (206aa)
YceI-like domain-containing protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5ST32_RHIET
YceI-like domain-containing protein
YceI-like domain-containing protein {ECO:0000313|EMBL:AGS20455.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
SCNpilot_cont_1000_bf_scaffold_77_curated_72
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75155..76000)
DNA (846bp) protein (282aa)
Putative arylamine N-acetyltransferase protein {ECO:0000313|EMBL:CCM78199.1}; EC=2.3.1.118 {ECO:0000313|EMBL:CCM78199.1};; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
Putative arylamine N-acetyltransferase protein n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0Q559_9RHIZ
N-acetyltransferase protein
SCNpilot_cont_1000_bf_scaffold_77_curated_73
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76318..76746
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HWE2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EPE97491.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
pyridoxamine 5'-phosphate oxidase-like protein
SCNpilot_cont_1000_bf_scaffold_77_curated_74
Rhizobium grahamii, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

76743..78086
DNA (1344bp) protein (448aa)
hypothetical protein; K01768 adenylate cyclase [EC:4.6.1.1]
histidine kinase n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000363CE12
Uncharacterized protein {ECO:0000313|EMBL:EPE97490.1}; TaxID=990285 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium grahamii CCGE 502.;"
SCNpilot_cont_1000_bf_scaffold_77_curated_75
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78262..78570
DNA (309bp) protein (103aa)
Mlr1995 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98JD3_RHILO
hypothetical protein
Mlr1995 protein {ECO:0000313|EMBL:BAB49233.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_1000_bf_scaffold_77_curated_76
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78596..79141
DNA (546bp) protein (182aa)
Mll6729 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q988I5_RHILO
hypothetical protein
Mll6729 protein {ECO:0000313|EMBL:BAB52965.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_1000_bf_scaffold_77_curated_77
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

79229..80908
DNA (1680bp) protein (560aa)
Uncharacterized protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XIK3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EFF73371.1}; TaxID=742159 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii ATCC 43553.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_77_curated_78
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

81077..81598
DNA (522bp) protein (174aa)
Mlr6724 protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q988I8_RHILO
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ETA71360.1}; TaxID=935547 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
SCNpilot_cont_1000_bf_scaffold_77_curated_79
unknown

Not on your lists

81707..82039
DNA (333bp) protein (111aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_77_curated_80
unknown

Not on your lists

comp(82089..83132)
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00037EE235
Uncharacterized protein {ECO:0000313|EMBL:CPR19274.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_77_curated_81
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83330..83611)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI000382170B
17 kDa surface antigen
17 kDa surface antigen {ECO:0000313|EMBL:ADH87398.1}; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_1000_bf_scaffold_77_curated_82
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(83890..85134)
DNA (1245bp) protein (415aa)
Arginine deiminase {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997}; Short=ADI {ECO:0000256|HAMAP-Rule:MF_00242};; EC=3.5.3.6 {ECO:0000256|HAMAP-Rule:MF_00242, ECO:0000256|SAAS:SAAS00092997};; Arginine dihydrolase {ECO:0000256|HAMAP-Rule:MF_00242}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens CCNWGS0286.;"
arginine deiminase (EC:3.5.3.6); K01478 arginine deiminase [EC:3.5.3.6] rbh
arginine deiminase n=1 Tax=Hoeflea sp. 108 RepID=UPI00035FA56D
SCNpilot_cont_1000_bf_scaffold_77_curated_83
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85152..86585)
DNA (1434bp) protein (478aa)
amino acid APC transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI000367C0F9
Transporter, basic amino acid/polyamine antiporter (APA) family {ECO:0000313|EMBL:EJJ28748.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
arginine/ornithine antiporter; K03758 arginine:ornithine antiporter rbh
SCNpilot_cont_1000_bf_scaffold_77_curated_84
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

86814..88268
DNA (1455bp) protein (485aa)
amino acid APC transporter n=1 Tax=Hoeflea sp. 108 RepID=UPI00038285D5
Transporter, basic amino acid/polyamine antiporter (APA) family {ECO:0000313|EMBL:EJJ28749.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
arginine/ornithine antiporter; K03758 arginine:ornithine antiporter
SCNpilot_cont_1000_bf_scaffold_77_curated_85
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88741..89937
DNA (1197bp) protein (399aa)
Succinylglutamate desuccinylase/aspartoacylase n=1 Tax=Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 / NCTC 12168) RepID=A6X1P2_OCHA4
Peptidase M14 {ECO:0000313|EMBL:KFL29994.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
succinylglutamate desuccinylase/aspartoacylase; K06987
SCNpilot_cont_1000_bf_scaffold_77_curated_86
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

89965..91416
DNA (1452bp) protein (484aa)
Putative amidohydrolase n=1 Tax=Agrobacterium tumefaciens CCNWGS0286 RepID=G6XYV0_RHIRD
Putative amidohydrolase {ECO:0000313|EMBL:EHH04137.1}; TaxID=1082932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens CCNWGS0286.;"
putative amidohydrolase
SCNpilot_cont_1000_bf_scaffold_77_curated_87
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

91609..92169
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3IYC0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EEQ95496.1}; TaxID=641118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_77_curated_88
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

92190..93329
DNA (1140bp) protein (380aa)
hemolysin D n=1 Tax=Ochrobactrum anthropi RepID=UPI000289D1B6
Hemolysin D {ECO:0000313|EMBL:EXL05870.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
RND family efflux transporter MFP subunit; K03585 membrane fusion protein
SCNpilot_cont_1000_bf_scaffold_77_curated_89
Ochrobactrum anthropi, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

93326..96496
DNA (3171bp) protein (1057aa)
transporter n=1 Tax=Ochrobactrum anthropi RepID=UPI000289E125
RND transporter {ECO:0000313|EMBL:EXL05869.1}; TaxID=529 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum anthropi.;"
hydrophobe/amphiphile efflux-1 (HAE1) family protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
SCNpilot_cont_1000_bf_scaffold_77_curated_90
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

96741..97448
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. CACIA14H1 RepID=V7EL76_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:CDP51373.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
Displaying items 61-90 of 213 in total

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