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SCNpilot_cont_1000_bf_scaffold_77_curated

Search features with annotation key words

Displaying items 181-210 of 213 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_1000_bf_scaffold_77_curated_180
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

206979..207572
DNA (594bp) protein (198aa)
UPI0003CFCDC9 related cluster n=1 Tax=unknown RepID=UPI0003CFCDC9
TetR family transcriptional regulator {ECO:0000313|EMBL:ESZ18775.1}; TaxID=1287182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
transcriptional regulator rbh
SCNpilot_cont_1000_bf_scaffold_77_curated_181
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(207590..208540)
DNA (951bp) protein (317aa)
LysR family transcriptional regulator n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FLE6_9RHIZ
LysR family transcriptional regulator {ECO:0000313|EMBL:ESX78775.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_77_curated_182
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

208652..209287
DNA (636bp) protein (212aa)
NAD(P)H dehydrogenase (quinone); K01118 FMN-dependent NADH-azoreductase [EC:1.7.-.-]
FMN-dependent NADH-azoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; EC=1.7.-.- {ECO:0000256|HAMAP-Rule:MF_01216};; Azo-dye reductase {ECO:0000256|HAMAP-Rule:MF_01216}; FMN-dependent NADH-azo compound oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01216}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
FMN-dependent NADH-azoreductase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TL54_MESCW
SCNpilot_cont_1000_bf_scaffold_77_curated_183
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(209341..209643)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Rhizobium loti RepID=M5AMQ5_RHILI
Branched-chain amino acid transport family protein {ECO:0000313|EMBL:AID31855.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_77_curated_184
Mesorhizobium sp. LNHC220B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(209829..210365)
DNA (537bp) protein (179aa)
UPI0003CDDFC9 related cluster n=1 Tax=unknown RepID=UPI0003CDDFC9
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:ESY88904.1}; TaxID=1287232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC220B00.;"
AzlC family protein
SCNpilot_cont_1000_bf_scaffold_77_curated_185
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

210553..211029
DNA (477bp) protein (159aa)
UPI0003CE6907 related cluster n=1 Tax=unknown RepID=UPI0003CE6907
AsnC family transcriptional regulator {ECO:0000313|EMBL:ESY66976.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_77_curated_186
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

211205..212416
DNA (1212bp) protein (404aa)
Membrane protein n=2 Tax=Mesorhizobium sp. LNJC380A00 RepID=V7GLP8_9RHIZ
Transporter {ECO:0000313|EMBL:CDX20381.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
transporter rbh
SCNpilot_cont_1000_bf_scaffold_77_curated_187
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(212578..212874)
DNA (297bp) protein (99aa)
UPI0003CEF5A9 related cluster n=1 Tax=unknown RepID=UPI0003CEF5A9
Uncharacterized protein {ECO:0000313|EMBL:ESY66980.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
transcription activator HlyU
SCNpilot_cont_1000_bf_scaffold_77_curated_188
Mesorhizobium sp. LNJC386A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(213078..213749)
DNA (672bp) protein (224aa)
UPI0003CF8A65 related cluster n=1 Tax=unknown RepID=UPI0003CF8A65
PadR family transcriptional regulator {ECO:0000313|EMBL:ESY38618.1}; TaxID=1287270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC386A00.;"
PadR-like family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_77_curated_189
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(213896..214276)
DNA (381bp) protein (127aa)
Thiol-disulfide oxidoreductase DCC n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TK94_MESCW
thiol-disulfide oxidoreductase DCC
Thiol-disulfide oxidoreductase DCC {ECO:0000313|EMBL:ADV11466.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_1000_bf_scaffold_77_curated_190
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(214347..214616)
DNA (270bp) protein (90aa)
UPI0003D01B7C related cluster n=1 Tax=unknown RepID=UPI0003D01B7C
Uncharacterized protein {ECO:0000313|EMBL:ESZ28787.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
hypothetical protein; K09712 hypothetical protein
SCNpilot_cont_1000_bf_scaffold_77_curated_191
Pseudomonas bauzanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

214786..215217
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Oceaniovalibus guishaninsula JLT2003 RepID=K2HJV1_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EZQ12820.1}; TaxID=653930 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas bauzanensis.;"
SCNpilot_cont_1000_bf_scaffold_77_curated_192
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

215339..216442
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000374D061
LuxR family transcriptional regulator protein {ECO:0000313|EMBL:AJD41699.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
LuxR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_77_curated_193
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(216563..216856)
DNA (294bp) protein (98aa)
UPI0003D06CFC related cluster n=1 Tax=unknown RepID=UPI0003D06CFC
Uncharacterized protein {ECO:0000313|EMBL:CDX24249.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
GYD family protein
SCNpilot_cont_1000_bf_scaffold_77_curated_194
unknown

Not on your lists

comp(217079..217654)
DNA (576bp) protein (192aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_77_curated_195
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(217680..219710)
DNA (2031bp) protein (677aa)
RNA polymerase sigma factor RpoD n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KJR1_MESAW
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
RNA polymerase sigma factor, sigma-70 family
SCNpilot_cont_1000_bf_scaffold_77_curated_196
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(220152..222092)
DNA (1941bp) protein (647aa)
DNA primase; K02316 DNA primase [EC:2.7.7.-]
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
DNA primase n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TK91_MESCW
SCNpilot_cont_1000_bf_scaffold_77_curated_197
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(222238..222612)
DNA (375bp) protein (125aa)
Putative integral membrane protein n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KL22_MESAW
Uncharacterized protein {ECO:0000313|EMBL:CDX51763.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
putative integral membrane protein
SCNpilot_cont_1000_bf_scaffold_77_curated_198
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

222978..224642
DNA (1665bp) protein (555aa)
Na+/Picotransporter n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YGX5_MESOW
Na+/Picotransporter; K03324 phosphate:Na+ symporter
Na+/Picotransporter {ECO:0000313|EMBL:AEH86921.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_1000_bf_scaffold_77_curated_199
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

224799..225008
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FM97_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESW81458.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_77_curated_200
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

225130..226314
DNA (1185bp) protein (395aa)
UPI0003CFF854 related cluster n=1 Tax=unknown RepID=UPI0003CFF854
MFS transporter {ECO:0000313|EMBL:ESZ28793.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
major facilitator superfamily protein
SCNpilot_cont_1000_bf_scaffold_77_curated_201
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(226326..227708)
DNA (1383bp) protein (461aa)
hypothetical protein n=1 Tax=Aureimonas ureilytica RepID=UPI0003681558
Uncharacterized HTH-type transcriptional regulator RHOS4_30730 {ECO:0000313|EMBL:CDX51758.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
GntR family transcriptional regulator
SCNpilot_cont_1000_bf_scaffold_77_curated_202
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

227841..228227
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI0003602C1E
Uncharacterized protein {ECO:0000313|EMBL:CDX45783.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
hypothetical protein
SCNpilot_cont_1000_bf_scaffold_77_curated_203
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(228268..230526)
DNA (2259bp) protein (753aa)
metal-transporting P-type ATPase; K01534 Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5] rbh
Probable metal-transporting P-type ATPase n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98IB8_RHILO
Probable metal-transporting P-type ATPase {ECO:0000313|EMBL:BAB49598.1}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
SCNpilot_cont_1000_bf_scaffold_77_curated_204
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

230634..231050
DNA (417bp) protein (139aa)
UPI0003D002CB related cluster n=1 Tax=unknown RepID=UPI0003D002CB
MerR family transcriptional regulator {ECO:0000313|EMBL:ESZ28795.1}; TaxID=1287116 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
transcription regulator MerR DNA binding protein
SCNpilot_cont_1000_bf_scaffold_77_curated_205
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

231091..232143
DNA (1053bp) protein (351aa)
L-aminopeptidase/D-esterase n=1 Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KK98_MESAW
L-aminopeptidase/D-esterase
L-aminopeptidase/D-esterase {ECO:0000313|EMBL:AGB44764.1}; Flags: Precursor;; TaxID=754035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
SCNpilot_cont_1000_bf_scaffold_77_curated_206
Mesorhizobium plurifarium, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(232226..232783)
DNA (558bp) protein (186aa)
GCN5-related N-acetyltransferase n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YGX3_MESOW
Uncharacterized protein {ECO:0000313|EMBL:CDX51755.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;"
GCN5-like N-acetyltransferase
SCNpilot_cont_1000_bf_scaffold_77_curated_207
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(233089..235281)
DNA (2193bp) protein (731aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451};; Peroxidase/catalase {ECO:0000256|HAMAP-Rule:MF_01961}; TaxID=1297570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
catalase/peroxidase; K03782 catalase-peroxidase [EC:1.11.1.21] rbh
catalase/hydroperoxidase HPI(I) n=1 Tax=Hoeflea sp. 108 RepID=UPI00037EDE7E
SCNpilot_cont_1000_bf_scaffold_77_curated_208
unknown

Not on your lists

comp(235412..235528)
DNA (117bp) protein (39aa)

This feature has no annotations

SCNpilot_cont_1000_bf_scaffold_77_curated_209
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

235619..236539
DNA (921bp) protein (307aa)
LysR family transcriptional regulator n=1 Tax=Hoeflea sp. 108 RepID=UPI00036B5929
LysR family transcriptional regulator {ECO:0000313|EMBL:ESY66995.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
LysR family transcriptional regulator; K04761 LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
Displaying items 181-210 of 213 in total

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