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SCNpilot_cont_1000_bf_scaffold_126_curated_236

Organism: scnpilot_dereplicated_Mesorhizobium_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 249254..250069

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein with HTH domain n=1 Tax=Caulobacter sp. AP07 RepID=J2GBV0_9CAUL similarity UNIREF
DB: UNIREF100
  • Identity: 36.2
  • Coverage: 257.0
  • Bit_score: 162
  • Evalue 5.30e-37
DNA-binding protein with HTH domain {ECO:0000313|EMBL:EJL27320.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.2
  • Coverage: 257.0
  • Bit_score: 162
  • Evalue 7.40e-37
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 26.4
  • Coverage: 265.0
  • Bit_score: 91
  • Evalue 3.60e-16

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Taxonomy

Caulobacter sp. AP07 → Caulobacter → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 816
ATGGACGTTCAAAGCGTGATCCAGCCAGTCGGGGACATGGTCTCCCTCATCGGCAAGAACGAATTCAGCCAGGGCTTCTTTCGCGCCATGGATCGGCTGATCGGCATCGACCATTGCACCGTCTTCATGGCTGACGAAAGCGCCATGCGGACGCTGGTGGCCGAGGCCAACACCGAGGAAACCTCAGGCCAGGCGCGGCTGCTGGCGGAGAGCTACATAAGGGAAGGCCACCGCAGCGATCCCGTCTGGAGCATGTGCGAGAGCCTGTCGGACGCGCCCTGCAAGGTGCTGATCTCGCCAGCCGATCGCGCCAACGACAGCTACCGCCAGGAGTTTTACGTCAAGCCCCGGATCCGGCACGAGCTCGCCATCACCTCGACGGTCAACGAGAAGCGGATTTACGCCGGTTTCTATCGTGAGGAGGGCCGCGACGATTTCTCCCGCGCCTCGATGGACTTCCTCCAGAACTGCGGCTCGGCGATCATCCAGATCCTGCACAAGCATGGCGAGGTCCACCGCTACATGGACACCGGCCGGCCGCGCGTGCTCAGCCAGAAAGCGCTTCTGGAACGCGTGCAGGCGGCGATCAACGCCGACAACAACACACTGACCGCGCGCGAGGCCGAGATCTGCGCCTCGATCGTGCTCGGCTATACGGTGCTCGGCATCAGCCTGAATCTCGGCATCAGCATCAACACGGTGGCGACGCATCGCAAGCGCGCCTACGCCAAGCTGCGCGTGTCGAGTCAGAACGAGCTGTTCGCGCGCTACTTCTCGATCGTCGAGCACAATATCGACCTGATGCGCCATCACTGA
PROTEIN sequence
Length: 272
MDVQSVIQPVGDMVSLIGKNEFSQGFFRAMDRLIGIDHCTVFMADESAMRTLVAEANTEETSGQARLLAESYIREGHRSDPVWSMCESLSDAPCKVLISPADRANDSYRQEFYVKPRIRHELAITSTVNEKRIYAGFYREEGRDDFSRASMDFLQNCGSAIIQILHKHGEVHRYMDTGRPRVLSQKALLERVQAAINADNNTLTAREAEICASIVLGYTVLGISLNLGISINTVATHRKRAYAKLRVSSQNELFARYFSIVEHNIDLMRHH*