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SCNpilot_cont_1000_bf_scaffold_263_curated_6

Organism: scnpilot_dereplicated_Mesorhizobium_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 5197..6165

Top 3 Functional Annotations

Value Algorithm Source
truB; tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] similarity KEGG
DB: KEGG
  • Identity: 88.3
  • Coverage: 325.0
  • Bit_score: 581
  • Evalue 1.80e-163
  • rbh
tRNA pseudouridine synthase B {ECO:0000255|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000255|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000255|HAMAP-Rule:MF_01080}; Short=Psi55 synthase {ECO:0000255|HAMAP-Rule:MF_01080};; tRNA pseudouridylate synthase {ECO:0000255|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000255|HAMAP-Rule:MF_01080}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain M similarity UNIPROT
DB: UniProtKB
  • Identity: 88.3
  • Coverage: 325.0
  • Bit_score: 581
  • Evalue 7.90e-163
tRNA pseudouridine synthase B n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=TRUB_RHILO similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 325.0
  • Bit_score: 581
  • Evalue 5.60e-163
  • rbh

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Taxonomy

Mesorhizobium loti → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
GTGGGGCGTAGGGGTAAGAAGAAGGGACGGCCGGTTTCCGGCTGGGTCGTGCTGGACAAGCCGGTTGGCATGGGCTCGACCGAGGCCGTCTCCAAGATCAAGTGGCTCTATCAGGCGGAGAAGGCCGGCCATGCCGGCACGCTCGACCCACTGGCTTCAGGCATGCTGCCGATCGCGCTCGGCGAGGCGACCAAGACCGTGCCTTACGTGCAGGATGGCGCCAAGGTCTACCGCTTCACCGTCGCCTGGGGCGAGGAGCGCTCGACCGACGATCTCGAGGGGCCGGTCACGAAAAGCTCCGACCTTCGCCCGTCGGAAGCGCAGGTGAAGGCGCTGCTGCCGAAATACATCGGCGTCATCATGCAGACGCCGCCGCAATTCTCTGCCATCAAGATCGCCGGCGAGCGCGCCTATGACCTCGCTCGCGAGGGCGAGACGGTCGACATTCCCGCCCGCGAGATCGAGGTCGGCCGCCTGGAGGTCGTCGAGCACAATGCCGATGGCAGCGTCTTCGAGATCGAGTGTGGCAAGGGCACCTATGTCCGGTCGCTGGCACGCGATATGGGCCGTGATCTCGGGTGCTTCGGTCACATCAGCCACTTGCGCCGGATCGAGGTCGAGCCCTTCACGCCGGAGGATTTCGTCACCATCGCCGAACTCGAGGCCGCCCGCTTCGGCGCTGGAAAAGAGGATGGCGATGAGGCCGGAGAGGACGCGGATATTCCCGTCGACTTCGCCGCGATCGATGCGCTGCTGGTCGATACGGTGGTGGCCCTCGACTGCCTGCCGCAGGTCCAGGTGAGCGACGACGCCGCGGCCAGGATACGCCTCGGCAACCCCGTCATCATCCGTGGCCGCGACGCGCCGGTCGAGGCGGAGGAAGCCTGCGCGACCGCGCGCGGCCGCCTGGTCGCCATCGGCGCCATCGAGCAGGGCATGTTCAAGCCGAAGCGTGTTTTCGTCGGCTAG
PROTEIN sequence
Length: 323
VGRRGKKKGRPVSGWVVLDKPVGMGSTEAVSKIKWLYQAEKAGHAGTLDPLASGMLPIALGEATKTVPYVQDGAKVYRFTVAWGEERSTDDLEGPVTKSSDLRPSEAQVKALLPKYIGVIMQTPPQFSAIKIAGERAYDLAREGETVDIPAREIEVGRLEVVEHNADGSVFEIECGKGTYVRSLARDMGRDLGCFGHISHLRRIEVEPFTPEDFVTIAELEAARFGAGKEDGDEAGEDADIPVDFAAIDALLVDTVVALDCLPQVQVSDDAAARIRLGNPVIIRGRDAPVEAEEACATARGRLVAIGAIEQGMFKPKRVFVG*