ggKbase home page

SCNpilot_cont_1000_bf_scaffold_77_curated_38

Organism: scnpilot_dereplicated_Mesorhizobium_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 40145..40993

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Rhizobium sp. CF142 RepID=J1T1F7_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 71.9
  • Coverage: 281.0
  • Bit_score: 415
  • Evalue 6.10e-113
Transcriptional regulator {ECO:0000313|EMBL:EJJ31368.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 281.0
  • Bit_score: 415
  • Evalue 8.60e-113
RpiR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 66.0
  • Coverage: 282.0
  • Bit_score: 386
  • Evalue 9.60e-105

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhizobium sp. CF142 → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 849
ATGGCTTCCCGCCTCGTATTACGCATTCAGGAGCGCTTCGCGCGCCTCACCACCAGCGAGCAGAAGCTGGCGCGCATGATTCTTGAGCGGCAGGACGACCTGCTGACCCATTCGGCGACCGAACTCGCCGCCATGGCGGACGTTTCAAAGGCGACGGCGGCGCGATTCTTCCGCTCGCTCGGCTATGCCGATTTCAACGAGGTGCGTCTCCAAGCGCGCGAGGAGCGCAACCGCACCGAGCCTTACCGCTATTCCGTGGTGGGATCGGAGAAGGTGGCGCTCGGTCGCGCGATCGGTAGCCATCTCGAGCTCGAGATCACCAACCTGACCCGGACCTTCGAGGAGTTGCGCTCGGACCGCCTGACCCGCGCCGCCGAGCTTCTTGGCGAGGCGCCGCGAGTCTGGCTGCTCGGCCTTGGCGCCGAGGAAGGGCTGGCGCGCTATGCCCGCCTGTTGCTGGCGCGGCTGCGCCACAATGTGATGATGCTCGGCATGAACGGCAATGCCTGGGCCGAGGACCTCGCCATGACCGGTCCGCGCGACGCGCTGGTGCTGGTCACACTGGAGCCCAGGCCGCGCATCCTCAAGCCGATCCTGAGCTATGCCCGCACGACGCGCATGAACGTCATCACCATCACCGACCGCAACTACCTGCTGCAGGCGCAGCGATATTCGGCCGTGGTGCTGCCTTGCCATGTGTCGAGCTTCGGGCTCGGCCCCTCGCACACATCCGTGGCCAGCGCGCTTCGCCTGCTGTCGATTGCCTTCGCCGCCTATGCCGGCGACACCGCCCTGCAGCGGCTGGAGATCATCAGCGGCATCCACGAGGAACTCGACGACACGGAATGA
PROTEIN sequence
Length: 283
MASRLVLRIQERFARLTTSEQKLARMILERQDDLLTHSATELAAMADVSKATAARFFRSLGYADFNEVRLQAREERNRTEPYRYSVVGSEKVALGRAIGSHLELEITNLTRTFEELRSDRLTRAAELLGEAPRVWLLGLGAEEGLARYARLLLARLRHNVMMLGMNGNAWAEDLAMTGPRDALVLVTLEPRPRILKPILSYARTTRMNVITITDRNYLLQAQRYSAVVLPCHVSSFGLGPSHTSVASALRLLSIAFAAYAGDTALQRLEIISGIHEELDDTE*