ggKbase home page

SCNpilot_cont_1000_bf_scaffold_77_curated_154

Organism: scnpilot_dereplicated_Mesorhizobium_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(179325..180419)

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory helix-turn-helix s, AraC family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WZ23_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 46.4
  • Coverage: 338.0
  • Bit_score: 286
  • Evalue 4.20e-74
DNA, contig: SP661 {ECO:0000313|EMBL:GAN15580.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.4
  • Coverage: 338.0
  • Bit_score: 286
  • Evalue 5.90e-74
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 335.0
  • Bit_score: 218
  • Evalue 3.40e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingomonas paucimobilis → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1095
ATGTCTGTCGCAAAGGCCGCCGAACAGACCGCGCCGCACCGTAGGCCGTCGCCATGCGAAGGCAAGCGGGCGACGATCCGCGCGCTGTTCCTCGAACCGATTGTCAGTGAGCTCGCGCGGCGACATGTGCCGATCGACGGGCTCCTGGCCCGGCACGGCTTTTCCAGGGCCGATATCCAGTCGCCCTACAGCCGGGTGTCGCTTTGCCTCTATGTCGAACTCATGGAGGATGCCGCCGCTCGCGCTGGCGACGGATTTTTCGGGCTCGACCTCGGGTCGCGGTTCAAGCTGCAGCAGCTCGGGCCATTCTATGCCCTGATGAGCAACGCCGAGAACCTGCGCGCGGCGCTCAGCATGTTTGCCCGCTTCCAGGGTGCCTGGCAGACCCGCACCAGCATGAATGTCCTGCGCGATGCGGAAACAACCAGCTACACCTACGGGATCGACGATCCAGCCATCTGGCCCCGGCGCCAGGATGCCGAGTTCACCCTGGCGGCTATGACGACCCTGGTGCGGCAGCTCGGCGCGCCGAGATGGTCTCCGCTACAGGTAGAGTTCGAGCATTCCGTCGCCGGGCGCGAGCCGCGTTTGCACGACTTCTTCAGGGCTCCGGTGCGGGGACAGGCGCGCTTCAATCGCATGACCATCTCCAACGACGACCTCGACCGGCCGTTCTGTCTCGGCGGCGCCGTTCCGGAGGCGGCCCGGGTGATCGAGCAACACCTGAGGGACCTTCTGTTTGACGAGGCGGACAACGATTCGACGCTCGCCGAGGCCGTCACGAACTGTGTCGCCAAGCGCCTCGGTCATGCCATCGTCGACGTCGACCTCGTCGCCAGGGAACTCAATCTCTCCACCCGCAGCCTGCGCCGCAAGCTGGACGAGGAGGGGACGTCCTTTCGTGAAATCCTGCAAGGGCAACGGCTGCTAAGGGCGCGCAAGCTGCTCGACGACGGCAGGCACCAGATATCCGAGCTCGCGGCTTTCGTCGGCTACTCCGACGTCGCGGTCTTCTCGCGGGCGTTCAAGGCATGGACCGGCGTGTCGCCGAGCGACTATGCATCGCACCGTCCGCTGGGCGCTGCCCGGCTCTGA
PROTEIN sequence
Length: 365
MSVAKAAEQTAPHRRPSPCEGKRATIRALFLEPIVSELARRHVPIDGLLARHGFSRADIQSPYSRVSLCLYVELMEDAAARAGDGFFGLDLGSRFKLQQLGPFYALMSNAENLRAALSMFARFQGAWQTRTSMNVLRDAETTSYTYGIDDPAIWPRRQDAEFTLAAMTTLVRQLGAPRWSPLQVEFEHSVAGREPRLHDFFRAPVRGQARFNRMTISNDDLDRPFCLGGAVPEAARVIEQHLRDLLFDEADNDSTLAEAVTNCVAKRLGHAIVDVDLVARELNLSTRSLRRKLDEEGTSFREILQGQRLLRARKLLDDGRHQISELAAFVGYSDVAVFSRAFKAWTGVSPSDYASHRPLGAARL*