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SCNpilot_cont_1000_bf_scaffold_1118_curated_11

Organism: scnpilot_dereplicated_Mesorhizobium_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 8196..12332

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; TaxID=266835 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 999.99
  • Bit_score: 2671
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 97.9
  • Coverage: 999.99
  • Bit_score: 2671
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta n=2 Tax=Mesorhizobium RepID=RPOB_RHILO similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 999.99
  • Bit_score: 2671
  • Evalue 0.0
  • rbh

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Taxonomy

Mesorhizobium loti → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4137
ATGGCCCAGACCCAGACTTTCAATGGCCGCAGACGCGTACGCAAGTTCTTCGGAAAGATTCCGGAAGTTGCGGAAATGCCGAACCTCATCGAGGTTCAAAAGGCATCTTACGACCAGTTCCTGATGGTGGATGAGCCCGAGGGCGGCCGTCCCGACGAAGGGCTGCAGGCCGTTTTCAAGTCGGTCTTCCCGATCTCCGATTTTTCCGGCTCCTCGATGCTGGAGTTCGTGAAGTACGAGTTCGAAGGACCGAAATTCGACGTCGACGAATGCCGTCAGCGCGACCTGACCTATGCCGCGCCGCTGAAGGTGACGCTGCGCCTTATCGTGTTCGATATCGACGAGGATACCGGCGCGAAGTCGATCAAGGACATCAAGGAGCAGGACGTGTACATGGGCGACATGCCGCTCATGACGCTGAACGGCACCTTCATCGTCAACGGCACCGAGCGCGTCATCGTCTCGCAGATGCACCGCTCGCCGGGCGTCTTCTTCGATCATGACAAGGGCAAGTCGCATTCGTCGGGCAAGCTGCTGTTTGCCGCGCGCGTCATCCCCTATCGCGGCTCCTGGCTCGACATCGAGTTCGATTCCAAGGACGTCGTGCACGCCCGCATCGACCGTCGCCGCAAGATTCCGGTGACGTCGCTGCTGATGGCGCTGGGCATGGACGGCGAGGAGATCCTCTCGACCTTCTACAACAAGATCACCTACCAGCGCGCCGGCGACCACTGGCGTATTCCCTTCAACGTCGAGCGCTTCCGTGGCCTCAAGGCCGTTGGCGACCTCGTTGATGCCGACACCGGCGAGATCGTCGTCGAGGCGGGCAAGAAGATCACCGCCCGCCAGGCGCGTCAGCTTGCCGAGAAGGGCCTCAAGGCGATCAAGGCGACCGACGAGGACCTGCTCGGCAACTACCTCGCCGAGGACATCGTCAACTACGCCACCGGCGAGATTTTCCTCGAGGCTGGCGACGAGATCGACGAGAAGACGCTGAAGGTGCTCCTCGGTACCGGCGAGCAGGAAGTGAACGTTCTCGACATCGACCACGTCAATGTCGGCGCCTACATCCGCAACACGCTCAATGCCGACAAGAACGAGAGCCGCCAGGACGCGCTGTTCGACATCTACCGCGTGATGCGCCCGGGCGAGCCGCCGACGCTGGAGACCGCCGAAGCCATGTTCAACTCGCTGTTCTTCGACAGCGAGCGCTATGACCTGTCGGCTGTCGGCCGCGTCAAGATGAACATGCGCCTCGAGCTCAAGGCCGAGGACACCGTGCGCGTGCTGCGCAAGGAGGACATCCTTGCCGTGGTCAAGACGCTGGTCGAGCTGCGTGACGGCAAGGGCGAGATCGACGACATCGACAATCTCGGCAACCGCCGCGTGCGCTCGGTCGGCGAGCTCATGGAGAACCAGTACCGCGTCGGCCTGCTGCGCATGGAGCGCGCGATCAAGGAACGCATGTCCTCGATCGAGATCGACACGGTGATGCCGCAGGATCTGATCAACGCCAAGCCGGCGGCCGCCGCCGTGCGCGAGTTCTTCGGTTCCTCGCAGCTGTCGCAGTTCATGGACCAGACGAACCCGCTGTCGGAAATCACCCACAAGCGCCGCCTGTCGGCGCTTGGCCCGGGCGGTTTGACGCGTGAGCGCGCCGGCTTCGAGGTGCGCGACGTTCACCCGACGCATTATGGCCGTATCTGCCCGATCGAAACGCCGGAAGGCCCGAACATCGGTCTGATCAACTCGCTGGCCACTTTCGCGCGCGTCAACAAGTACGGCTTCATCGAGAGCCCGTACCGCAAGATCGTCGACGGCAAGCTGACCAACGAAGTCGTGTATCTGTCGGCCATGGAAGAGGCCAAGCACCACGTCGCGCAGGCCAACGCCGAGCTCGACAAGGACGGTCGTTTCGTCGACGAGTTCGTCATCTGCCGCAGCGCCGGCGAAGTGATGATGGCGCCGCGCGAGAACGTCGACCTGATGGACGTGTCGCCGAAGCAGATGGTCTCGGTCGCCGCGGCGCTGATCCCGTTCCTCGAGAACGACGACGCCAACCGCGCGCTGATGGGCTCGAACATGCAGCGTCAGGCCGTGCCGCTGGTGCGCGCCGAGGCGCCGTTCGTCGGCACCGGCATGGAGCCGGTCGTCGCTCGTGACTCCGGCGCCGCCATCGGCGCCCGTCGCGGCGGCATCGTCGACCAGGTGGACGCGACGCGTATCGTCATCCGCGCCACGGAAGATCTCGATCCCGGCAAGTCCGGCGTCGACATCTACCGGCTGATGAAGTTCCAGCGTTCCAACCAGAACACCTGCATCAACCAGCGTCCGCTGGTGCGTATGGGTGATCGCGTGAACAAGGGCGACATCATCGCCGACGGTCCGTCGACGGAGCTCGGCGATCTGGCGCTCGGCCGCAACGTGCTGGTCGCGTTCATGCCGTGGAACGGCTACAACTACGAGGACTCGATCCTGCTCTCCGAGCGCATCGTGGCCGACGACGTCTTCACCTCGATCCACATCGAGGAGTTCGAGGTCATGGCCCGCGACACCAAGCTCGGGCCGGAGGAAATCACGCGCGACATTCCGAACGTTTCGGAAGAGGCGCTGAAGAACCTCGACGAGGCCGGCATTGTCTATATCGGCGCCGAAGTGCAGCCGGGCGACATCCTGGTCGGCAAGATCACGCCGAAGGGCGAGAGCCCGATGACGCCGGAAGAGAAGCTTCTGCGCGCCATCTTCGGCGAGAAGGCCTCCGACGTGCGCGACACGTCCATGCGCATGCCTCCGGGCACCTTCGGCACGGTCGTCGAAGTGCGCGTCTTCAACCGCCACGGCGTTGAGAAGGACGAGCGCGCCATGGCCATCGAGCGCGAGGAGATCGAGCGTCTCGCCAAGGACCGTGACGACGAGCAGGCGATCCTCGACCGCAACGTCTATTCGCGCCTTTCCGACATGCTCGTCGGCAAGGATGCGATTGCAGGGCCGAAGAGCTTCAAGAAGGGTTCGAAGCTTTCCAAGGAACTGCTCGACGAGTATCCGCGTTCGCAGTGGTGGCAGTTCGCCGTCGAGGACGAAAAGCTCCAGGGCGAACTGGAAGCTCTGCGTGGCCAGTACGACGACTCCAAGAAGGCGCTCGAGCAGCGCTTCATGGACAAGGTCGAGAAGGTGCAGCGCGGCGACGAAATGCCTCCGGGCGTCATGAAGATGGTCAAGGTCTTCGTGGCCGTGAAGCGCAAGATGCAGCCGGGCGACAAGATGGCCGGCCGTCACGGCAACAAGGGTGTCGTGTCGCGCATCGTTCCGGTCGAGGACATGCCTTTCCTCGAGGACGGCACGCATGCCGACATCGTGCTCAACCCGCTGGGCGTGCCGAGCCGCATGAACGTAGGCCAGATCCTGGAGACGCATCTGGGCTGGGCCTGCGCCGGCATGGGCAGGAAGATCGGCGAGCTGATCGACGCCTACAAGGCGGGCGGCGACATCAAGCCGCTGCGCAAGACGCTGGAGAGCTTCATGCCGGCCAACGACCGCAACGAGCCGATTCGCGAATACGACGACGAGAGCATCATTCGCCTCAGCGAACAGATGCGTCGCGGCGTCTCCATCGCGACACCGGTGTTCGACGGCGCGCACGAGGTCGACATCAACACCATGCTGGAGCAGGCTGGCCTGCACACCAGCGGGCAGTCGCAGCTCTATGACGGCCGCACCGGCGAACCTTTCGATCGCAAGGTGACGATGGGCTACATCTACATGCTGAAGCTCCATCACCTCGTGGACGACAAGATTCACGCGCGTTCGATCGGCCCGTACTCGCTCGTCACCCAGCAGCCGCTGGGCGGCAAGGCGCAGTTCGGCGGTCAGCGCTTCGGCGAAATGGAGGTCTGGGCGCTGGAAGCCTACGGCGCCGCCTACACGCTGCAGGAAATGCTGACGGTGAAGTCGGACGACGTGGCGGGCCGCACCAAGGTCTACGAGGCGATCGTGCGCGGCGACGACACGTTCGAGGCTGGCATTCCGGAGAGCTTCAACGTGCTCGTCAAGGAAATGCGCTCCCTGGGCCTCAACGTCGAACTGGAGAACACCAAGTTCGAGGACGCACAGACCCGTCTGCCCGACGCGGCCGAGTAA
PROTEIN sequence
Length: 1379
MAQTQTFNGRRRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMVDEPEGGRPDEGLQAVFKSVFPISDFSGSSMLEFVKYEFEGPKFDVDECRQRDLTYAAPLKVTLRLIVFDIDEDTGAKSIKDIKEQDVYMGDMPLMTLNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKSHSSGKLLFAARVIPYRGSWLDIEFDSKDVVHARIDRRRKIPVTSLLMALGMDGEEILSTFYNKITYQRAGDHWRIPFNVERFRGLKAVGDLVDADTGEIVVEAGKKITARQARQLAEKGLKAIKATDEDLLGNYLAEDIVNYATGEIFLEAGDEIDEKTLKVLLGTGEQEVNVLDIDHVNVGAYIRNTLNADKNESRQDALFDIYRVMRPGEPPTLETAEAMFNSLFFDSERYDLSAVGRVKMNMRLELKAEDTVRVLRKEDILAVVKTLVELRDGKGEIDDIDNLGNRRVRSVGELMENQYRVGLLRMERAIKERMSSIEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESPYRKIVDGKLTNEVVYLSAMEEAKHHVAQANAELDKDGRFVDEFVICRSAGEVMMAPRENVDLMDVSPKQMVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEPVVARDSGAAIGARRGGIVDQVDATRIVIRATEDLDPGKSGVDIYRLMKFQRSNQNTCINQRPLVRMGDRVNKGDIIADGPSTELGDLALGRNVLVAFMPWNGYNYEDSILLSERIVADDVFTSIHIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVQPGDILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTFGTVVEVRVFNRHGVEKDERAMAIEREEIERLAKDRDDEQAILDRNVYSRLSDMLVGKDAIAGPKSFKKGSKLSKELLDEYPRSQWWQFAVEDEKLQGELEALRGQYDDSKKALEQRFMDKVEKVQRGDEMPPGVMKMVKVFVAVKRKMQPGDKMAGRHGNKGVVSRIVPVEDMPFLEDGTHADIVLNPLGVPSRMNVGQILETHLGWACAGMGRKIGELIDAYKAGGDIKPLRKTLESFMPANDRNEPIREYDDESIIRLSEQMRRGVSIATPVFDGAHEVDINTMLEQAGLHTSGQSQLYDGRTGEPFDRKVTMGYIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVELENTKFEDAQTRLPDAAE*