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SCNpilot_cont_1000_bf_scaffold_377_curated_63

Organism: scnpilot_dereplicated_Mesorhizobium_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(69630..70640)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1287281 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC405B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 336.0
  • Bit_score: 658
  • Evalue 5.30e-186
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 336.0
  • Bit_score: 657
  • Evalue 2.60e-186
UPI0003CE4120 related cluster n=1 Tax=unknown RepID=UPI0003CE4120 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 336.0
  • Bit_score: 658
  • Evalue 3.80e-186

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Taxonomy

Mesorhizobium sp. LNJC405B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
ATGATCCAGAAAAACTGGCAGGAACTGATCAAGCCGAACAAGATCGAGTTCTCGTCGAAGAAGAAGACGCTGACCACCCTGGTCGCCGAGCCGCTCGAGCGCGGCTTCGGCCTGACGCTCGGCAACGCGCTGCGCCGCGTGCTCCTGTCCTCGCTGCGTGGCGCGGCTGTGACCGCCGTGCAGATCGACGGCGTCCTGCACGAATTCTCGTCCATCGCCGGCGTGCGCGAGGACGTGACGGACATCGTGCTCAACATCAAGGAAATCGCCATCCGCATGGAAGGCGATGGTCCCAAGCGCATGGTCGTTCGCAAGCAGGGCCCGGGCGCCGTGCTGGCTGGCGACATCCAGACAGTCGGCGACGTCGAGATCCTCAACCCCGACCACGTCATCTGCACGCTGGACGAGGGCGCCGAGATCCGCATGGAGTTCACGGTCGACACCGGCAAGGGTTACGTGCCGGCCGATCGCAATCGAGCCGAGGACGCGCCGATCGGCCTGATCCCGGTCGATAGCCTCTATTCGCCGGTCAAGAAGGTCTCCTACAAGGTCGAGAACACCCGCGAGGGCCAGGTTCTCGACTACGACAAGCTGACCATGACCATCGAGACCGACGGTTCGATCTCGGGCGAGGACGCCGTGGCTTTCGCCGCTCGCATCCTGCAGGACCAGTTGGGCCTGTTCGTCAACTTCGACGAGCCGCAGAAAGAAGTCGCGGCGGAAGCCGTTACCGAGCTCGCCTTTAATCCGGCGCTGCTCAAGAAGGTCGACGAACTCGAGCTTTCGGTGCGTTCGGCCAACTGCCTGAAGAACGACAATATCGTCTACATCGGCGACCTGATCCAGAAGACCGAAGCCGAGATGCTGCGCACCCCGAACTTCGGCCGCAAGTCGCTGAACGAGATCAAGGAAGTTCTGGCGGCGATGGGGTTGCACCTCGGCATGGAAGTGCCGGACTGGCCGCCGGAAAATATCGAAGACCTCGCCAAGCGTTACGAAGACCAATATTGA
PROTEIN sequence
Length: 337
MIQKNWQELIKPNKIEFSSKKKTLTTLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAVQIDGVLHEFSSIAGVREDVTDIVLNIKEIAIRMEGDGPKRMVVRKQGPGAVLAGDIQTVGDVEILNPDHVICTLDEGAEIRMEFTVDTGKGYVPADRNRAEDAPIGLIPVDSLYSPVKKVSYKVENTREGQVLDYDKLTMTIETDGSISGEDAVAFAARILQDQLGLFVNFDEPQKEVAAEAVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLNEIKEVLAAMGLHLGMEVPDWPPENIEDLAKRYEDQY*