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SCNpilot_cont_1000_bf_scaffold_790_curated_8

Organism: scnpilot_dereplicated_Mesorhizobium_1

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(7846..9249)

Top 3 Functional Annotations

Value Algorithm Source
multidrug transporter MatE n=1 Tax=Rhizobium loti RepID=UPI000365F35B similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 467.0
  • Bit_score: 848
  • Evalue 2.70e-243
MATE efflux family protein {ECO:0000313|EMBL:AID33762.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 467.0
  • Bit_score: 853
  • Evalue 1.60e-244
multidrug efflux protein NorM; K03327 multidrug resistance protein, MATE family similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 467.0
  • Bit_score: 848
  • Evalue 1.10e-243
  • rbh

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Taxonomy

Mesorhizobium huakuii → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1404
ATGTCCGCGATTGAAGCCGGCGCCTCAGCGCCGGGAAACCTGTGGCGTGAAGAGATCAGGGCGATGGTGGCGCTGGCCTGGCCGATGGTGCTCACCAATCTCGGCCAGACCGCCATGACCGCGACCGACGTGATGATGATGGGACGGCTCGGCCCCGAGACGCTGGCCAGCGGCGCGCTTGGCTCCAACCTCTATTTCATGCCGCTGATCTTCGGGCTCGGCCTGATGCTGGCCACGTCGCCGATGATGGCCACCGAACTCGGTCGCCGCCGCCACTCCGTGCGCGACCTGCGCCGCACGGTGCGCCAGGGCCTGTGGCTGGCGATCCTGATCTCCATCCCGATCTGGATATTCCTGTGGAACGGCGAGCGAATATTGCTGGCGATGGGCCAGGAGCCCGACCTTGCGCATCGCGCCGGCACCTATCTGCGCTGGCTGCAATGGGCGGTGCTGCCCTTCTACGGCTACATCGTGCTGCGCTCCTTCATCTCGGCGCTGGAGCGACCGGGCTGGGCGCTGGTCATCGTCTTCGTCGCGGTGGCCTGCAACGTCGTCTTCAACTGGGTGTTCATGTTCGGCAATCTCGGCTTCCCTGCGATGGGCATAGCCGGGTCCGGCCTCGCCACGTCGCTGTCCAGCATGTTGATGTTCGTTGGCATGGCGGCCGTGGTGATGCTGGAGCGGAAGTTCCGCCGCTACCGCCTGTTCGGCCGCTTCTGGCGCTCGGACTGGCCGCGCTTCAAGGGGCTGCTGCGGCTCGGCCTTCCGATTGCCGGTATCCTCGCCTTCGAGGTGACGATCTTCAACGCGGCGGCGCTGCTGATGGGCCTGATCGACGCGGATTCGCTGGCCGCGCACGCCATCGCCATCCAGATCTCGTCGATCACCTTCATGGTGCCGCTCGGCCTCAACCAGGCGGTGACGGTGCGCGTCGGCCTCGCCCATGGCGCCGGCAATCCGGAAGGCGTGTCGCGCGCCGGCTGGACGGCCTATGTCATCGGCGTCGCCTTCATGGCGCTGATGGCGCTGATGATGATCCTGTGGCCGCGCCTGCTGATCAGCGCCTTCATCGACCTCTCCGCACCGGCCAATGCCCGGGTGATCGGGCTCGCCGTGTCGTTCCTGGTCTTCGCCGCGCTGTTCCAGATCTTCGATGGTGCCCAGGCGGTTGCCGCCGGCATGCTGCGCGGCCTGCACGACACCAAGATACCGATGATCTACGCCGCGATCGGCTATTGGGGCATCGGCCTGCCGCTCGGCGTGCTGCTCGCCTTCCACTTCGGCTTCAACGGCGTCGGCATTTGGGCGGGCCTGTCGATCGGCCTCGCGGTGGTCGCGGCGCTGCTGCTCGGCCGATGGCTGAGGCGCGATCGCATCTCGCCGCGGCTGACCTTCGCGCATTGA
PROTEIN sequence
Length: 468
MSAIEAGASAPGNLWREEIRAMVALAWPMVLTNLGQTAMTATDVMMMGRLGPETLASGALGSNLYFMPLIFGLGLMLATSPMMATELGRRRHSVRDLRRTVRQGLWLAILISIPIWIFLWNGERILLAMGQEPDLAHRAGTYLRWLQWAVLPFYGYIVLRSFISALERPGWALVIVFVAVACNVVFNWVFMFGNLGFPAMGIAGSGLATSLSSMLMFVGMAAVVMLERKFRRYRLFGRFWRSDWPRFKGLLRLGLPIAGILAFEVTIFNAAALLMGLIDADSLAAHAIAIQISSITFMVPLGLNQAVTVRVGLAHGAGNPEGVSRAGWTAYVIGVAFMALMALMMILWPRLLISAFIDLSAPANARVIGLAVSFLVFAALFQIFDGAQAVAAGMLRGLHDTKIPMIYAAIGYWGIGLPLGVLLAFHFGFNGVGIWAGLSIGLAVVAALLLGRWLRRDRISPRLTFAH*