ggKbase home page

SCNpilot_expt_1000_bf_scaffold_833_curated_30

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: 25841..26440

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2T2F8_LEIAQ similarity UNIREF
DB: UNIREF100
  • Identity: 61.7
  • Coverage: 193.0
  • Bit_score: 237
  • Evalue 1.20e-59
HTH-type transcriptional regulator BetI {ECO:0000313|EMBL:KJL32620.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 193.0
  • Bit_score: 309
  • Evalue 3.60e-81
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 189.0
  • Bit_score: 171
  • Evalue 2.60e-40

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium azadirachtae → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGTCCGCCGAGCGTCGCCTCCGTCTCACGCCCGACGAACGCCGGGAGCAGCTGATCGCCATCGGCGTCAACTTCCTCGCCGAGCACACGCTCGACGAGCTGACGATGGAGGCGCTCGCGCAGCGCGCCGGCGTCTCCCGCCCCCTGCTGTTCCACTACTTCGACACGCGCCAGGGCATGCACCTCGCCGTGGTCGCGACCGCCAGGGACAGCCTGCTGCTGGCCACCGAGCCACGCCCCGAGCTGCCGCCGCGCGAGCGCATCGAGGACACGCTGCTGCGCATCGCCGAGTTCGTGCAGCAGCACCAGGGCACGTTCCACTCGCTGGTGCGCGGCATCGCCAGCGGGGACTCGGCTGTGCGCCGTGTGGTGGACGAATCCCGCGAACGCAACGCCGAGCGCCTGGTCGAGGCGTTCACGGAGCTCGGTGCGCCGGACTCCCCCGCGCTGAGGATCGCGCTGCGGGCCTGGGTGTCGTTCACGGAGGAGACTCTGATCAGCCTGCTCGTGGAGCGCGACGCCTCCCCCGCGGACGTGGTGCGCTTCCTGCTGGGCACCATCGACGGCGTGGTCGGCGCCGCCGGCGAGCTCAGGGTCTGA
PROTEIN sequence
Length: 200
MSAERRLRLTPDERREQLIAIGVNFLAEHTLDELTMEALAQRAGVSRPLLFHYFDTRQGMHLAVVATARDSLLLATEPRPELPPRERIEDTLLRIAEFVQQHQGTFHSLVRGIASGDSAVRRVVDESRERNAERLVEAFTELGAPDSPALRIALRAWVSFTEETLISLLVERDASPADVVRFLLGTIDGVVGAAGELRV*