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SCNpilot_expt_1000_bf_scaffold_1788_curated_20

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(17026..17766)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 245.0
  • Bit_score: 465
  • Evalue 3.70e-128
rph; RNase PH; K00989 ribonuclease PH [EC:2.7.7.56] similarity KEGG
DB: KEGG
  • Identity: 88.3
  • Coverage: 239.0
  • Bit_score: 424
  • Evalue 2.80e-116
Ribonuclease PH n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KJP3_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 93.9
  • Coverage: 246.0
  • Bit_score: 460
  • Evalue 8.50e-127

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Taxonomy

Microbacterium oxydans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 741
ATGTCAGACATCGTCCGCGCAGACGGCCGCAGCACCGACCAGCTCCGAGAGGTGACGATCGAGCGCGGCTGGTCCGCGCACGCCGAGGGTTCGGCGCTCGTCAGCTTCGGCGGCACCAAGGTGCTGTGCACGGCGTCGTTCACGAACGGCGTGCCGCGCTGGCTGACCGGCAAGGGCAAGGGCTGGGTCACCGCCGAGTACGCGATGCTGCCGCGGGCCACCAACTCGCGCAACGACCGTGAGAGCGTGAAGGGCCGCATCGGCGGTCGCACGCACGAGATCTCCCGCCTGATCGGCCGCGCGCTGCGCGCCGTCGTCGACACGAAGGCGCTCGGCGAGAACACGATCGTGATCGACTGCGACGTGCTGCAGGCCGACGGCGGCACCCGCACCGCCGCGATCACCGGCGCCTACGTCGCCCTGGCCGACGCCATCGAGTGGGGCCGCGAGAAGAAGTTCATCGGGAAGAACGCGACGCCGCTGCTGGACTCGGTGGCCGCGGTCTCGGTCGGGATCATCGACGGCGAGCCCATGCTCGATCTGGCATACGTCGAGGACGTGCGCGCGGAGACCGACATGAACGTGGTCGTCACCGGCCGCGGCCTGTTCGTCGAGGTGCAGGGCACCGCCGAGGGCGCACCGTTCGACAAGCGTGAGCTGGACGCCCTGCTGGAGCTCGGCGTCAACGGCTGCGCCTCGCTCCGGGAGCACCAGCTGGCTTCGCTGGCGGCGGAGCGATGA
PROTEIN sequence
Length: 247
MSDIVRADGRSTDQLREVTIERGWSAHAEGSALVSFGGTKVLCTASFTNGVPRWLTGKGKGWVTAEYAMLPRATNSRNDRESVKGRIGGRTHEISRLIGRALRAVVDTKALGENTIVIDCDVLQADGGTRTAAITGAYVALADAIEWGREKKFIGKNATPLLDSVAAVSVGIIDGEPMLDLAYVEDVRAETDMNVVVTGRGLFVEVQGTAEGAPFDKRELDALLELGVNGCASLREHQLASLAAER*