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SCNpilot_expt_1000_bf_scaffold_444_curated_12

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: 13901..14542

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034AD76C similarity UNIREF
DB: UNIREF100
  • Identity: 79.3
  • Coverage: 208.0
  • Bit_score: 322
  • Evalue 3.10e-85
Contig_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIP93681.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 210.0
  • Bit_score: 326
  • Evalue 2.30e-86
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.6
  • Coverage: 203.0
  • Bit_score: 247
  • Evalue 3.10e-63

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Taxonomy

Microbacterium sp. MEJ108Y → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 642
GTGCCGAAGGCCACACAGGACACGCCCCGCACTCGGGCGGCGCAGCACAAGCGCATCGAGATCCTGAACGCGGCCGTCGAGATCTTCGGGAGCAAGGGCTCGACCAACGGCACCCTCGCGGATGTGGCCGAGCAGGTCGGGCTGACCCACGCCGGTGTGCTGCATCACTTCGGGTCGAAGCAGCGGCTGCTGCTCGAGGTGCTCGCCTACCGCGATCAGGCCGACGTCGCCGACCTGGACGACAAGCACATCCCGGGCGGACTCGAGCTGTTCCTGCACCTCATCCGCACCGCGTTCGCGAACGAGCGACGGCCGGGCATCGTGCAGGCCTACACCGTGCTCTCGTCCGAATCGGTGACCGACGGGCATCCCGGGCGGGACTACTTCGAGGATCGCTACACGACGCTGCGCCGCGAGGTGGCCGAGGCGTTCGAGGTGCTGTGCAGGGCCGAGGGCGTCACCGACACCGGCACGATCGCCCACGCCTCCGCCGCCATCCTCGCCGTCATGGACGGCCTGCAGCTGCAGTGGCTGCTGCATCCCGAGATCGTCGACCTCGGCAGGGCCAGCGAGTTCGCCATCACGGCGATCGTCAACAGCGTGCTGAACCCCGGACCGCCGCTGGAGTCCTACCGCCGCTGA
PROTEIN sequence
Length: 214
VPKATQDTPRTRAAQHKRIEILNAAVEIFGSKGSTNGTLADVAEQVGLTHAGVLHHFGSKQRLLLEVLAYRDQADVADLDDKHIPGGLELFLHLIRTAFANERRPGIVQAYTVLSSESVTDGHPGRDYFEDRYTTLRREVAEAFEVLCRAEGVTDTGTIAHASAAILAVMDGLQLQWLLHPEIVDLGRASEFAITAIVNSVLNPGPPLESYRR*