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SCNpilot_expt_1000_bf_scaffold_444_curated_31

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: 37673..38344

Top 3 Functional Annotations

Value Algorithm Source
Fis family transcriptional regulator n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000346565B similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 222.0
  • Bit_score: 375
  • Evalue 3.30e-101
Contig_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIP93711.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 222.0
  • Bit_score: 382
  • Evalue 4.90e-103
response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; K07667 two-component system, OmpR family, KDP operon response regulator KdpE similarity KEGG
DB: KEGG
  • Identity: 81.5
  • Coverage: 222.0
  • Bit_score: 363
  • Evalue 4.00e-98

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Taxonomy

Microbacterium sp. MEJ108Y → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 672
GTGAAGCTGCTGGTCGCCGACGACGACCCGCAGATGGTGCGCGCGCTGCGGATCACGCTCGCCGCGCACGGGTACGAGGTGGTCGCCGCCGTCGACGGGCCCGGCGCCATCGCCGCGGCCGCGCAGACCCACCCCGACATCGTGCTGCTGGACCTGGGTATGCCGCACCTCGACGGGGTGCAGGTGATCCAGGCGCTGCGCGGATGGACCGCCATCCCGATCATCGTCGTCTCGGGTCGCACCGGATCAGCCGACAAGGTGGAGGCGCTGGATGCCGGCGCAGACGACTACGTGACCAAGCCGTTCCAGATCGACGAGCTGCTCGCCCGGCTGCGCGCGCTGTCCCGCCGCGCCGCGGCCGAGTCCGGCGAGGCGACCGTCGCATTCGGCGACGTGGTCGTCGACCTGTCCGTCAAGTCGGTCACCCGCGCCGGCACGCGCGTGCACCTGACGCCGACGGAATGGCGGATGCTGGAGCACCTCGCCCGGCATCCAGAGGCGCTCGTCACCCGGCAGGAGCTGCTGCGCGAGCTGTGGGGCTCGGATCAGGTCGCCGACACCGGCTACCTGCGGCTGTACATGTCGCAGCTGCGCAAGAAGCTCGAGGCGGATCCCGCGCATCCGGTGCACCTGCTCACCGAGCAGGGGATGGGCTACCGGCTGGTGCGCTGA
PROTEIN sequence
Length: 224
VKLLVADDDPQMVRALRITLAAHGYEVVAAVDGPGAIAAAAQTHPDIVLLDLGMPHLDGVQVIQALRGWTAIPIIVVSGRTGSADKVEALDAGADDYVTKPFQIDELLARLRALSRRAAAESGEATVAFGDVVVDLSVKSVTRAGTRVHLTPTEWRMLEHLARHPEALVTRQELLRELWGSDQVADTGYLRLYMSQLRKKLEADPAHPVHLLTEQGMGYRLVR*