ggKbase home page

SCNpilot_expt_1000_bf_scaffold_444_curated_57

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: 67012..69492

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 843.0
  • Bit_score: 1216
  • Evalue 0.0
DEAD/DEAH box helicase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L543_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 84.8
  • Coverage: 838.0
  • Bit_score: 1411
  • Evalue 0.0
Ski2-like helicase {ECO:0000313|EMBL:KJL33394.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.9
  • Coverage: 842.0
  • Bit_score: 1433
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium azadirachtae → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2481
GTGACCCTCCTCGATCCCACGACCGTCAACGGCGCCGACGCGGATGCCGTCTACCTGGCGTTCGTGGAGTGGGCGGAGTCAACCGGCATCAGCCTCTATCCCGCGCAGGACGAGGCGGTCATCGAGATCGTCTCGGGTCAGAACCTGATCCTGTCCACGCCCACGGGCACGGGGAAGTCGCTGGTCGCGATCGGCGCCCACTTCGCCGCGCTGGCCGAGGGGCGCCGCACCTATTACACGGCGCCGATCAAGGCGCTCGTCAGCGAGAAGTTCTTCAGCCTGGTCGACGTGTTCGGAGCCGCGAACGTCGGCATGGTCACCGGCGACTCGGCGGTGAACGCCGACGCCCCGATCGTCTGCTGCACGGCCGAGATCCTCGCGAACCTCGCGCTGCGCGAGGGTGCGGATGCCGACGTCGGCCAGGTCGTGATGGACGAGTTCCACTTCTACGGCGACCCCGACCGGGGCTGGGCATGGCAGGTGCCGCTGCTCACGCTCCCTCAGGCGCAGTTCGTGCTCATGTCCGCGACCCTCGGCGACGTCACGGAGCTGGCATCCGATCTGACACGGCGCACCGGACGGGAGACGGCCGTGGTCACGGGCGTGGAGCGGCCCGTTCCACTGCACTTCTTCTACGAGACGACGCCGATCCACGAGACCATCGAGGACCTGCTGCACACGGACCGCGCCCCGGTCTACATCGTGCACTTCTCGCAGGCCGCGGCGATGGAGCGCGCGCAGGCGCTCGCCAGCGCGAAGGTCGCCACGCGCGAACAGCGCGATGCGATAGCCGACCTCATCGGCGGGTTCCGGTTCACCACAGCGTTCGGCAGGACGCTCTCGCGCCTGCTGCGGCTCGGCATCGGCGTGCACCACGCCGGGATGCTGCCGAAGTACCGGCGTCTGGTCGAGCAGCTCGCCCAACGCGGGATGCTGCGGGTGATCTGCGGCACCGACACGCTCGGCGTCGGCATCAACGTGCCCATCCGCACCGTGCTGCTCACCGCGCTGACCAAGTTCGACGGCCAGCGGATGCGGCAGCTGAACGCCCGCGAGTTCCACCAGATCGCAGGGCGCGCCGGCCGCGCCGGCTTCGACACGGCGGGCACGGTCGTGGCGCAGGCCCCGGAACACGAGACCGAGAACCTCGCGGCGATCCGCAAGGCCGGCGACGACCCGAAGAAGAAGCGCAAGATCATCCGCAAGAAGGCGCCGGACGGTTTCGTGTCCTGGGGCGAGCCGTCGTTCCAGAAGCTGATCTCCTCCGAGCCCGAGACGCTCACCTCGCACATGCAGCTCACCAGCGCCATGATGCTCAACGTCATCGCGCGCGGCGGCGACGTGTTCGGCAATATGCGCGCGCTGGTATACGACAATCACGAGCCCAGGGCGAAGCAGCGCCTCCTCGCCCTGAGAGCGCTCGGGATCTACCGGACGCTGCTCGAGTCGGGCGTGGTGGAGAACGGTCCGGAGGGAGTCAGGCTCACGGTGGACCTGCAGCCGAACTTCGCCCTCAACCAGCCGCTGTCGCCCTTCGCCCTCGCGGCGTTCGAGCTGCTCGACCCGGGCTCGGCGACCTTCGCCCTGGACATGATCTCGATCGTCGAGTCGACCCTCGACGACCCACGCGCGATCCTCTCGCAGCAGGAGTTCATCGCACGGGGCGAGGCCGTCGCCGCGATGAAGGCCGAGGGCATCGAGTACGACGAGCGCATGGAGCTGCTCGAGCAGATCACGTGGCCCAAGCCGCTCGAGGAGCTGCTCGCCGCCGCCTTCCAGACCTTCAGCGCCGCGCAGCCATGGATCCGCGACTTCGAGCTGCACCCCAAGTCTGTGGTGCGCGACATGTACGAGCGGGCCATGTCGTTCGGGGAGTACGTCGCCTTCTACAAGACGGCGCGGTCGGAGGGCGTGGTGCTGCGCTACCTCTCGGACGCCTATCGCGCGGCATCTCAGACGATCCCCGAGCATCTGAAGACCGAGGAGCTGCGGGATCTGATCGAGTGGCTCGGCGAGCTGGTGCGCCAGGTCGACTCGAGCCTGCTGGACGAGTGGCAGGAGCTGGTCAGCGGCGTGCTGGTCGACCATGCGGAAGGGCCGGTCGTCCCGCCCGCGCCCAAGCGGCTCACCGCGAACGTGCGCGCCTTCCGCATCCTGGTGCGCAACGAGCTGTTCCGGCGCGTGCAGCTCGCCGCTCGCGAGGACCTCGAGTCGCTGGATGCCCTGGACCCCGCGTTCGACGGCTGGTCCGACGCCCTCGACGCGTACTTCGCCGAGCACGACGAGATCCTCACCGGAGCGGATGCCCGCGGGGCCGCCCTCCTGCTCATCGAGCAGGGCGCGGAGCAGTGGACCGTGCGGCAGATCCTGGACGACCCCGCCGGGGATCACGACTGGGGCATCTCCGCGACCGTCGACCTGGCGGCATCCGACGAGGCCGGCGAAGCCGTGATCCGCGTCACGGGCGTCGACCGGCTGTGA
PROTEIN sequence
Length: 827
VTLLDPTTVNGADADAVYLAFVEWAESTGISLYPAQDEAVIEIVSGQNLILSTPTGTGKSLVAIGAHFAALAEGRRTYYTAPIKALVSEKFFSLVDVFGAANVGMVTGDSAVNADAPIVCCTAEILANLALREGADADVGQVVMDEFHFYGDPDRGWAWQVPLLTLPQAQFVLMSATLGDVTELASDLTRRTGRETAVVTGVERPVPLHFFYETTPIHETIEDLLHTDRAPVYIVHFSQAAAMERAQALASAKVATREQRDAIADLIGGFRFTTAFGRTLSRLLRLGIGVHHAGMLPKYRRLVEQLAQRGMLRVICGTDTLGVGINVPIRTVLLTALTKFDGQRMRQLNAREFHQIAGRAGRAGFDTAGTVVAQAPEHETENLAAIRKAGDDPKKKRKIIRKKAPDGFVSWGEPSFQKLISSEPETLTSHMQLTSAMMLNVIARGGDVFGNMRALVYDNHEPRAKQRLLALRALGIYRTLLESGVVENGPEGVRLTVDLQPNFALNQPLSPFALAAFELLDPGSATFALDMISIVESTLDDPRAILSQQEFIARGEAVAAMKAEGIEYDERMELLEQITWPKPLEELLAAAFQTFSAAQPWIRDFELHPKSVVRDMYERAMSFGEYVAFYKTARSEGVVLRYLSDAYRAASQTIPEHLKTEELRDLIEWLGELVRQVDSSLLDEWQELVSGVLVDHAEGPVVPPAPKRLTANVRAFRILVRNELFRRVQLAAREDLESLDALDPAFDGWSDALDAYFAEHDEILTGADARGAALLLIEQGAEQWTVRQILDDPAGDHDWGISATVDLAASDEAGEAVIRVTGVDRL*