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SCNpilot_expt_1000_bf_scaffold_537_curated_3

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(2446..3327)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Gordonia kroppenstedtii RepID=UPI000363280D similarity UNIREF
DB: UNIREF100
  • Identity: 40.9
  • Coverage: 281.0
  • Bit_score: 216
  • Evalue 4.30e-53
Als operon repressor {ECO:0000313|EMBL:KJF25173.1}; TaxID=103808 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AD45.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.5
  • Coverage: 270.0
  • Bit_score: 196
  • Evalue 5.00e-47
helix-turn-helix domain, rpiR family protein similarity KEGG
DB: KEGG
  • Identity: 39.6
  • Coverage: 280.0
  • Bit_score: 184
  • Evalue 5.70e-44

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Taxonomy

Rhodococcus sp. AD45 → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 882
GTGAGCGCGCAGACGGACGAGAGCTCCGCCCCCAGCGTCGCGCAATGGGTCGCCGACATCCGGGGCAGGTCCGCTCACGGCCGGCTCGGCAAGAGCGCCTCGCGCATGCTCGCCACCATCGTCCGCGAACCCCACTTCGCCAGTTACGCGACTACCGGGGAGCTGGCGACACGGGCGAACATCAACCCCTCCTCGGTCACGCGGGTCTCCCAGGCGCTCGGTTATGAGGGCTGGCCCGATCTGCGCGGGTCCCTACGCGAGGTGTACGTGCGTTCGGTCAGTGCGGACGGCGTCGAAGCCCGGCCGTCCTCAGCATCCGGATCCGTCGTCGAACAGCTCATCCAGCACGACATCGAGAACGTCTCCGGCCTGCAGAACCCGAAGACCCGCGCGGCCATCGAAGCGGTCGGCGCGCGCGTGGCGCGCTCGCGTCGGATCCTGGTGGTGGGCAGCGGCCTCGGATCGGTGCCGGCGGATGTCTTTGGGCATCTGGGCCTCATCGCAGGACTCGACGTCCGGGTCGCACTGGGCGCCGCCACCTCACAGATCGCGGCCGTGCAGCTCCTGGGCGCGGGCGATTGCCTGGTCGCGGTGAACGTCTGGCGCACCACCCGCACGCTGCGCCAGCTCGTCGCACTCGCCCGATCCCGCGCGGTGGCGGTGTGTCTGCTGACCGACATCGAGGGCTCTCGGCTCGAAGCGCACGCAGATGAGGTGGTGGTCGCCTCCACCGCCTCGGCGGGACCGGCGCCCTCGCTCGTCGCGCTCACCAGCGTCGCTCACGCCGTGCTTCTGTCCGCCGCGGGGGGTGACGCACTCGCCCACGCGCACGGCGTCGAACAGGCCTGGGATGCGGCAGGGCTGATCGACGACGACGAGTGA
PROTEIN sequence
Length: 294
VSAQTDESSAPSVAQWVADIRGRSAHGRLGKSASRMLATIVREPHFASYATTGELATRANINPSSVTRVSQALGYEGWPDLRGSLREVYVRSVSADGVEARPSSASGSVVEQLIQHDIENVSGLQNPKTRAAIEAVGARVARSRRILVVGSGLGSVPADVFGHLGLIAGLDVRVALGAATSQIAAVQLLGAGDCLVAVNVWRTTRTLRQLVALARSRAVAVCLLTDIEGSRLEAHADEVVVASTASAGPAPSLVALTSVAHAVLLSAAGGDALAHAHGVEQAWDAAGLIDDDE*