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SCNpilot_expt_1000_bf_scaffold_537_curated_5

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: 3723..5165

Top 3 Functional Annotations

Value Algorithm Source
major facilitator superfamily transporter metabolite:H symporter n=1 Tax=Rhodococcus opacus RepID=UPI00029CAF95 similarity UNIREF
DB: UNIREF100
  • Identity: 55.0
  • Coverage: 473.0
  • Bit_score: 493
  • Evalue 2.30e-136
Putative niacin/nicotinamide transporter NaiP {ECO:0000313|EMBL:AHK30929.1}; TaxID=543736 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus PD630.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.0
  • Coverage: 473.0
  • Bit_score: 493
  • Evalue 3.20e-136
yceI2; metabolite transport protein YceI similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 471.0
  • Bit_score: 349
  • Evalue 1.30e-93

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Taxonomy

Rhodococcus opacus → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1443
GTGCCCACCTCTCCCCCATCGAACACACAAGCCGCAGCGCTTCTCACTCGCCTCGACCAGCTCCCCCTCACCAAGGAGCACCGCCGCGTCCGCCGCCTCGGCGGTCTCGGCTATCTCTTCGACACCTTCGACGGCACCCTCATGGGGTACGCGATGGCGGCGGTGATCGCCCTGTGGGCGATCGAGGAATCCACCGCCGGCTGGCTGCTGTCGGCGATCTTCTTCGGCTACCTCATCGGCTCCCTCGCCTCGGGAGTGCTCGCCGACCGATTCGGCCGGAGACGCCTCATGATGGCGGCGCTGCTCATCTTCACCGTCTTCAGCGTGCTGATGGCCACCTCCCAGTCCCCCACGGAGCTGTTCATCTGGCGCATGCTGAGCGGCATCGGGTTGGGCGCCGAGAGCGTCCTGGTCGTGCCGTACCTGTCCGAGCTCGTGCCCGCCCGCTACCGGGCCAGTTTCCTCGGACGGACGGTCGCCTTCTTCGGATACGGCGGGGTGCTCGCCGGCATCGTCGCACTCCTGGTGATCGGCCCGAACGCGCACACCTGGTGGGGCTGGCGCATCGCCGGCGTCATCGCCGTGGTGCCCATCGTCCTGCTGCTGATCATGCGCCGCTCGCTGCCCGAGTCGCCGCGCTTCCTCATCTCGCAGGGCCGCATGACCGAGGCGGAGCAGATCGTCGAGCGCTTCGAGCGCTCGGCGGGTGTCGATTCGGCTCAGGCCGCCGCGCAGGCGACCGCCCAGGCGGAGGCGCAGGCACTGCCGGATGCCTCGCCGGTCGCGGCGAGCAGGCTCAGCCTGGGAGCGCAGCTGCGCGCGGTCTTCGCACCCGGTCTGCGCAGACGCACCCTGGTCATCTGGCTGCTGTGGTTCTCTCTCACCGGCGTCAACTACGGATTCGCCAGCTGGATGGTGAACATGCTCATCATCGCCAAGGGCTTCACGGTCAGCAACAGCTTCCTGTTCGCCTTCACGGCGAGCGGCGCACAGATTCCCGGCTACCTGTTGGCGGCATGGCTGGTGAACAAGTTCGAGAAGAAGTGGGTGATCGCCTCCTTCGCCGCCGCAGCCGCGTTGTCGGCCATCGGCGTGGCGATGGCCGAGGACGTCGTGGTGCTGCTGATCGCGTCCGCCCTGCTGGCCGCCTTCATCAACGGTTCCGCCGCCGCCTACTACGGATACACCGCGGAACTGTACCCGACGGCCATCCGCACCACCGGGGTCGGGTTCGCCTCCGCCGCCGGGCGCGTGGGCGCCATCCTCGCACCGATCACCATCGGCTACGTGTTCGCGGCCGCCGGTTTCGCGACCGTGTTCCTGGGGTTGACCGCCCTGCTGCTGTTCGCGGTGACGATCACGGTCATCTTCGGGGAACGCACCAACGGCCTCAGCCTTGAGAACATCGAATCTCTGGCACAGACGGAAGGGACAGCTGTATGA
PROTEIN sequence
Length: 481
VPTSPPSNTQAAALLTRLDQLPLTKEHRRVRRLGGLGYLFDTFDGTLMGYAMAAVIALWAIEESTAGWLLSAIFFGYLIGSLASGVLADRFGRRRLMMAALLIFTVFSVLMATSQSPTELFIWRMLSGIGLGAESVLVVPYLSELVPARYRASFLGRTVAFFGYGGVLAGIVALLVIGPNAHTWWGWRIAGVIAVVPIVLLLIMRRSLPESPRFLISQGRMTEAEQIVERFERSAGVDSAQAAAQATAQAEAQALPDASPVAASRLSLGAQLRAVFAPGLRRRTLVIWLLWFSLTGVNYGFASWMVNMLIIAKGFTVSNSFLFAFTASGAQIPGYLLAAWLVNKFEKKWVIASFAAAAALSAIGVAMAEDVVVLLIASALLAAFINGSAAAYYGYTAELYPTAIRTTGVGFASAAGRVGAILAPITIGYVFAAAGFATVFLGLTALLLFAVTITVIFGERTNGLSLENIESLAQTEGTAV*