ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1082_curated_17

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: 17428..17841

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.0
  • Coverage: 128.0
  • Bit_score: 107
  • Evalue 1.40e-20
nucleotide-binding protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B2E685 similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 136.0
  • Bit_score: 145
  • Evalue 4.40e-32
nucleic acid-binding protein similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 130.0
  • Bit_score: 91
  • Evalue 1.80e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Knoellia sinensis → Knoellia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 414
ATGGACGAGCATGCTGTGCTCGTCGACGCGAACGTCGTCATCTACGCGCTGGGACATGCCGAGCCGCAGCGAACGCGCTGCCGAGCCTTTCTGGAAGACCTCTGGTCGGGGACGGGGCGCGGATACGCGAGCGTCGAGATGGTGCAGGAGGTAGTCCATCATCGACTCCGTCGCGGGGGTCGCGCGGATGCCGTGAATGACGCCCGTGACATGTCGAAGCTGCTCATCGTGCTGGACTTCGACCACGAGGTGCTGGAGCGCTCACTCGAATTGATCGAGACGACGAGCATCCGCGGGCGGGACGCCGTGCATGCGGCGACGGCGCTCGCGTACGGCATCGAGACCATCGCCTCCTCGGATCCGGCCTTCGACGGCATCCCGGGGATCACTCGAGTCGATCCGCTGACCATGTGA
PROTEIN sequence
Length: 138
MDEHAVLVDANVVIYALGHAEPQRTRCRAFLEDLWSGTGRGYASVEMVQEVVHHRLRRGGRADAVNDARDMSKLLIVLDFDHEVLERSLELIETTSIRGRDAVHAATALAYGIETIASSDPAFDGIPGITRVDPLTM*