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SCNpilot_expt_1000_bf_scaffold_4072_curated_10

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: 9136..10038

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine recombinase XerD n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KM08_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 82.9
  • Coverage: 299.0
  • Bit_score: 497
  • Evalue 1.30e-137
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 299.0
  • Bit_score: 508
  • Evalue 4.60e-141
xerD; site-specific recombinase XerD; K04763 integrase/recombinase XerD similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 308.0
  • Bit_score: 451
  • Evalue 2.60e-124

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Taxonomy

Microbacterium foliorum → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGCCGCTCCACCGTGCGCTGAACGCCTACCTGCGGCACATCACGATCGAGCGCGGGCTGTCAGAGCACTCGATCGCCGCGTACCGTCGCGACCTGAACGCGTACGTCGACTGGCTCCGTGAGCGGGGGATCGAGGCGACCGAGGGCATCACTCAGGCGATCGTGGCGGAGTTCATCGGCGAGCGCTCCGCGGCCGACCCGCCGCCGGCGGCGACCAGTCTCGCCCGGTTGCAGTCCTCGGTGCGGGGCTGGCACCGCTTCCTCGCCAGGGAGGGCATCGAGGAGGACGACCCCACCGGCCGGATGCGCCCTCCGAAGACCCCGCAGCGGCTGCCGAAGGCGCTGACGATCGAGCAGGTCGAACGGCTCCTGGCCGCACCCTCGCCGGAGGATCCGATGGGCATCCGCGACCGCGCCCTGCTCGAGCTGCTCTACGCGACCGGAGCCCGCGTGTCCGAGGCCGTGTCGCTTGATGTGGACGACCTCTCCTACGGCGACGTACTGCGCCTGCGCGGCAAGGGCGACAAGGAGCGCATCGTCCCGGTGGGCTCCTACGCCCGTGCCGCCGTCGACGCGTACCTGACCAGGGTGCGCCCAGGACTGGCGGCCAAGGGGCGCGCGACCGCCCGGCTGTTCCTGGGCGCGCGCGGCGCCCCGCTGTCGCGACAGAGCGCTTGGCTGATCATCCGCGCCGCGGCCGAGAAGGCGCAGATCACCTCGGAAGTGTCCCCGCACACGCTGCGCCACTCCTTCGCCACGCACCTGCTGCAGGGCGGCGCCGACGTCCGCGTCGTGCAGGAGCTGCTGGGTCACGCATCCGTCGCCACGACGCAGATCTACACCCACGTCTCGGTCGACACCCTGCGGGACGTCTACGCGACCTCTCATCCGCGGGCGACCTAG
PROTEIN sequence
Length: 301
MPLHRALNAYLRHITIERGLSEHSIAAYRRDLNAYVDWLRERGIEATEGITQAIVAEFIGERSAADPPPAATSLARLQSSVRGWHRFLAREGIEEDDPTGRMRPPKTPQRLPKALTIEQVERLLAAPSPEDPMGIRDRALLELLYATGARVSEAVSLDVDDLSYGDVLRLRGKGDKERIVPVGSYARAAVDAYLTRVRPGLAAKGRATARLFLGARGAPLSRQSAWLIIRAAAEKAQITSEVSPHTLRHSFATHLLQGGADVRVVQELLGHASVATTQIYTHVSVDTLRDVYATSHPRAT*