ggKbase home page

SCNpilot_expt_1000_bf_scaffold_1301_curated_2

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(776..2662)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI000377DF36 similarity UNIREF
DB: UNIREF100
  • Identity: 65.2
  • Coverage: 564.0
  • Bit_score: 742
  • Evalue 4.80e-211
Uncharacterized protein {ECO:0000313|EMBL:ETK34539.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.9
  • Coverage: 624.0
  • Bit_score: 814
  • Evalue 1.10e-232
Helicase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 38.7
  • Coverage: 599.0
  • Bit_score: 384
  • Evalue 6.20e-104

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1887
GTGATCTTCGTCGAACTGGGCGAGGGCCGTCGCCCGACTGTCGTGATCACGCGGAAGTCAGGAACTCCGACGGGGGCCTGGGCGCATCTACAATCTCTGCTATCGCGTGGGATCGTAGGCGGAGATTCCGCTCGGCTGGAGGTGCGAGCCGAAGTCTTCCTCGCGGAGCTCGCCGGCATCCGCGAAGTTCGAACGTTCTTCAATGAGCAGATCGACTTCGGCGAAAAAGTCAGAAGTCAACTCGCGACCCTGGCCAGTGACCGCAAGGCTCGCGAAGACGCAGTAGAGGGTGCGGTGCGAGTTTCGACAGCTGAGCTGGCCGCGGAATTGGCCGCAAACGGGTTCCGGCGAACATTGAAGCCGTTCCAGCTGCGCAATCTTGCCAAGATCTCACTTCTCCCGCATGGAGCCGACTTCTCTGTGCCTGGGGCCGGGAAGACAACCGTTGCGCTAGCCAATCATTCACTCCAACGTTCTCGAGGAATCGTTGAGCGCCTGCTTGTGGTCGCTCCTATCGCCGCATTCGAGGCATGGAAATCGGACTCATCCGCCTGCCTTGTGGTTGCCCCCACCATTGCCGTGCATTCGGGGCCCGGAGGACTGATCCCGCGAGACACGGAGATTCTTCTTACGAATTACAACCGCGTAGCCGCCGATTACGAGCGGGTTCGTGATTTCGTAGCGGCCGCACCGACACAGGTCGTGCTCGACGAGGCGCATCGGATCAAGCGGGGAGCAGCGGGCGTGCATGGGCGTGCCGTGTTGGACCTAGCGTACGTCGCTCGTCGACGCGATGTCTTGACAGGGACACCGGCTCCACAAGGTGCAACTGACCTCATTGCACTGATGAGGTTTCTCTACCCTGGGCAAGATCGCGCGATCCTCCCGGAAAGCGCTTATGACGAGGCGATGGGGCGCGACCCAGACGTCGTCAAGGAGACCAGCCAGGCAATCCAGACGTACTTCACGCGAACGGCGAAGTCCAGTCTCGGCATACCAGACCCAGTGTGGGAGATCGTCGATCGTCCAATGGGACCTATCCAGAGCGCGATCTACGCTGCGCTCGTAGGAAGATACCGCGGCGACTTCAGTCTTCCGAAGGAGTCCAGGCGTGAGTTCGACAGGCTCGGTCGTATCGTGATGTACCTTCTGGAGGCGGCCACGAACCCCGCTCTTCTAGTAGCTGGTTCTGACGCTGACGATGAGAAAGGATTCGCCCATCCGCCGATCATGCTGAATGGCGACGAGCCCTTGACCAAGCTTCTATACGACTACGGGCAGTACGAGCGACCTTGGAAATACACCTACGTGCAGGAGGCAGTAGCCGCCGCCGCCGCCCGAGGAGAAAAGGTTCTGGTCTGGTCGACATTTGTGCGTAATCTGAAGGCTCTGGCGCGAGACCTGAGTGCTTTCAACCCCGCAATCATTCACGGTGGAGTTCCGCCTGAAGACGCGGCTCCGGCTGGGGCGCTAACCCGCGAGGCCGAACTTGAGCGCTTCCGGAACGATCCTGGGTGTTCCGTGTTGTTGGCAAACCCCGCCGCGGCAGGCGAGGGCATCAGCCTTCATCACTGGTGCCATCATGCGATCTTTCTCGACAGGACCTTCAACGCCGGCCACTTCCTGCAGAGTCAAGACCGGATCCATCGCCTGGGGTTGGCACAGGACGTTGTCACCCGGTTCACCGTGCTCCTCAGTGACGAATCGATCGACGGCGTCGTGGATGATCGACTACGAGAGAAGGTGAGTGCTCTCGCACAACTGATGAACGACCCTGGGTTGGTACGCGTTGCACTGCCTGAAAGCGACGAGAACCACGAAGCACCTGCAGCTGAGCAGGATGATATGTCGGCAATTCTCGCTCACATGCACGTCGAGTCATTGTGA
PROTEIN sequence
Length: 629
VIFVELGEGRRPTVVITRKSGTPTGAWAHLQSLLSRGIVGGDSARLEVRAEVFLAELAGIREVRTFFNEQIDFGEKVRSQLATLASDRKAREDAVEGAVRVSTAELAAELAANGFRRTLKPFQLRNLAKISLLPHGADFSVPGAGKTTVALANHSLQRSRGIVERLLVVAPIAAFEAWKSDSSACLVVAPTIAVHSGPGGLIPRDTEILLTNYNRVAADYERVRDFVAAAPTQVVLDEAHRIKRGAAGVHGRAVLDLAYVARRRDVLTGTPAPQGATDLIALMRFLYPGQDRAILPESAYDEAMGRDPDVVKETSQAIQTYFTRTAKSSLGIPDPVWEIVDRPMGPIQSAIYAALVGRYRGDFSLPKESRREFDRLGRIVMYLLEAATNPALLVAGSDADDEKGFAHPPIMLNGDEPLTKLLYDYGQYERPWKYTYVQEAVAAAAARGEKVLVWSTFVRNLKALARDLSAFNPAIIHGGVPPEDAAPAGALTREAELERFRNDPGCSVLLANPAAAGEGISLHHWCHHAIFLDRTFNAGHFLQSQDRIHRLGLAQDVVTRFTVLLSDESIDGVVDDRLREKVSALAQLMNDPGLVRVALPESDENHEAPAAEQDDMSAILAHMHVESL*