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SCNpilot_expt_1000_bf_scaffold_1301_curated_12

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: 9289..12174

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 948.0
  • Bit_score: 1623
  • Evalue 0.0
topA; topoisomerase IA; K03168 DNA topoisomerase I [EC:5.99.1.2] similarity KEGG
DB: KEGG
  • Identity: 80.1
  • Coverage: 908.0
  • Bit_score: 1418
  • Evalue 0.0
DNA topoisomerase I n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349C762 similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 959.0
  • Bit_score: 1603
  • Evalue 0.0

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Taxonomy

Microbacterium azadirachtae → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2886
GTGTATGGTGTGCTTCGAAGAAAGGACGCTCTCTTGGCACAAGGCAAGAAGCTCGTCATCGTCGAGTCCCCGACGAAGATGCGGTCGATCCAGGGATACCTCGGCGATGGCTACGAGGTGCTCAGCTCCGTCGGCCACATCCGCGACCTCGCCGACAAGAAGGACATCCCCGCCGCCGACAAGCAGGCGTACGGGAAGTACTCGATCGACGTCGACCACGACTTCGACCCCTACTACGTCGTCTCCGACCGCAAGACGAAGACGGTCGCCGAACTGAAGCGCGCCCTGAAGACCGCCGACGAGCTCCTGCTCGCCACTGATGAGGACCGCGAGGGCGAGGCCATCGCGTGGCACCTGCTGGAGACCCTCAAGCCGAAGGTCCCCGTCAAGCGGATGGTCTTCCACGAGATCACCAAGGACGCGATCCAGGCGGCCGTCGGCCGCACCCGCGACCTCGACCTGGCGCTCGTCGACGCGCAGGAGACCCGCCGCATCCTGGACCGGCTCTACGGCTGGGACGTCTCACCCGTGCTCTGGTACAAGGTCAAGTCCGGCCTGTCCGCCGGACGCGTGCAGTCTGCCGCGACCCGCATGATCGTCGACCGCGAGCGCGAGCGGATGGCGTTCACCTCGGCTGAGTACTGGGACGTCGAGGCGCAGGCCTCCGCGACCGGGCAGTCCTTCGGTGTGCGCCTGGTGCGCGTGGACGGCGGACAGCTCGCCCGCGGCACCGACTTCGACGACACCGGAAAGCTGAAGAAGGCCGTCGTCGTCCTGACCGAGGCCGAGGTCATGGCCCTCGCCGCGGCCGTGAACGACGCGGGCGCCGCGACCGTCAGCAAGGTCGAGGCCAAGCCGGGAACCCGCAGCCCCTATGCACCCTTCACCACCTCCACCATGCAGCAGGAGGCCGGGCGCAAGCTCTCGATGAGTGCGAAGCAGGCGATGAGCGTCGCCCAGCGCCTCTACGAGAAGGGGTACATCACCTATATGCGTACGGACTCGGTCGCGCTGTCGACGCAGGCCATCCAGGCCGCGCGCAGCCAGGCCGTCGCGCTGTACGGCGACAGCGCGGTGCCGCTCAAGCCCCGTGTGTACAAGTCCAAGAGCAAGAACGCGCAGGAGGCTCACGAGGCGATCCGTCCATCGGGCGAGAACTTCCGGACGCCGGCATCCCTCTCCTCCCAGCTCGACCGCGAGGAGCAGCGTCTCTACGACCTGATCTGGAAGCGCACGGTCGCCAGCCAGATGTCCGACGCCAAGTACGAGACCACTACGGTCACGCTGGAGTCGGACGCCGACGGCAAGCGGCTCGAGTTCACCGCATCCGGCACCGTCTACACCTTCAAGGGCTTCCTGGAGGCGTACGAGGAGGGCCGCGACGAGAAGCGCAACGCGCAGGACTCCGCCGAGAACCAGTCCCTGCCCGCCGTCGCCGTCGGCGACGAGCTGGCGATGGCGGATGCCGAGGCCAAGGGCCACCGCACCACCCCCAAGCCCCGCTACACCGAGGCCTCGCTGGTCAAGGCGCTCGAGGAGCACGGCATCGGCCGCCCCTCGACGTTCGCGAGCATCATCGGCACCGTGATCGACCGTGGTTACGCGTCCAAGCGCGGCCAGGCGCTCGTGCCGACCTGGCTGGCGTTCAGCGTCGTGCGGCTCCTCGAGCAGCACTTCGCCGATCTGATCGACTACGACTTCACCGCGGCACTCGAGGACGACCTCGACGCGATCGCCCGTGGTGAGCAGAACCGCAACGAGTGGCTGCGCTCCTTCTACTTCGGCTCCGACGCCCATGTCGGGCTGCGGCAGGTGGTCGACAATCTCGGCGAGATCGACGCGCGGGCGCTGAACTCCACCCGCATCACCGACACCGCCACGCTCCGCTTCGGAAAGTACGGGCCTTACCTCGAGGTCGTCGACCCGGCGAACCCCGATGCCAAGCCGCGCATCGTCAATGTGCCCGAGGACCTCGCCCCCGATGAGCTGACGCCCGCCAAGGCGCAGGAGCTGGTCGACGCGCCTGTCGCCGGCGATCGGGTGCTGGGGGAGAACCCCGAGAACGGCAAGATCGTCGTGGTCAAGGACGGACGGTTCGGCCCGTACGTGCAGGAGAACGACCCGGTGTCCGACGAGGACGAGGTCGACACCGAGACGGGTGAGGTCGTCGAGGCCGCGCCGAAGAAGAAGAGCGCCAAGAAGAAGGAGGCCGCGCCCAAGCCGCGCACCGCCTCGCTGTTCCGCTCCATGTCGGTGGACACCATCGACCTCGACACCGCGCTGCAGCTGCTCAGCCTGCCTCGCGTGGTCGGCAAGGACCCTGAGTCCGGCGAGGAGATCACCGCGCAGAACGGCCGCTACGGCCCGTACCTGAAGAAGGGCGCTGATTCGCGGTCGCTGGAGAGCGAATCCCAGATCTTCGACGTGACGCTCGAGCAGGCGCTGGCGATCTACGCCCAGCCGAAGTACGGTGCGGGTTCGCGGCGGGCTTCCAGCGCGCTCAAGGAGTTCGAGGCCGACCCCGTCAGCGGCAAGCCGATCCGCATCCGCGACGGACGCTTCGGCGCCTACGTGACCGACGGCGAGACGAACGTCACCATCCCGCGCGGGCAGACCCCGGACGACGTCACCTTCGAGATCGCCGTGCAGATGCTCGCCGACAAGCGGGCCAAGGGCCCTGCGCCCAAGCGCGGGGCGAAGAAGACGGCGGCCAAGAAGGCTCCCGCGAAGAAGCCCGCCGCGAAGAAGGCACCTGCGAAGAAGGCACTGACCGACGATCAGAAGGCGGCCGCGCGCTCGGAGGCCGCCAAGAAGGCGGCCGCCACCCGCAAGGCCAACGCGATCGCGAAGGCCGACGCGGCGCGCAAGGCCAAGGCAGGCTCGTGA
PROTEIN sequence
Length: 962
VYGVLRRKDALLAQGKKLVIVESPTKMRSIQGYLGDGYEVLSSVGHIRDLADKKDIPAADKQAYGKYSIDVDHDFDPYYVVSDRKTKTVAELKRALKTADELLLATDEDREGEAIAWHLLETLKPKVPVKRMVFHEITKDAIQAAVGRTRDLDLALVDAQETRRILDRLYGWDVSPVLWYKVKSGLSAGRVQSAATRMIVDRERERMAFTSAEYWDVEAQASATGQSFGVRLVRVDGGQLARGTDFDDTGKLKKAVVVLTEAEVMALAAAVNDAGAATVSKVEAKPGTRSPYAPFTTSTMQQEAGRKLSMSAKQAMSVAQRLYEKGYITYMRTDSVALSTQAIQAARSQAVALYGDSAVPLKPRVYKSKSKNAQEAHEAIRPSGENFRTPASLSSQLDREEQRLYDLIWKRTVASQMSDAKYETTTVTLESDADGKRLEFTASGTVYTFKGFLEAYEEGRDEKRNAQDSAENQSLPAVAVGDELAMADAEAKGHRTTPKPRYTEASLVKALEEHGIGRPSTFASIIGTVIDRGYASKRGQALVPTWLAFSVVRLLEQHFADLIDYDFTAALEDDLDAIARGEQNRNEWLRSFYFGSDAHVGLRQVVDNLGEIDARALNSTRITDTATLRFGKYGPYLEVVDPANPDAKPRIVNVPEDLAPDELTPAKAQELVDAPVAGDRVLGENPENGKIVVVKDGRFGPYVQENDPVSDEDEVDTETGEVVEAAPKKKSAKKKEAAPKPRTASLFRSMSVDTIDLDTALQLLSLPRVVGKDPESGEEITAQNGRYGPYLKKGADSRSLESESQIFDVTLEQALAIYAQPKYGAGSRRASSALKEFEADPVSGKPIRIRDGRFGAYVTDGETNVTIPRGQTPDDVTFEIAVQMLADKRAKGPAPKRGAKKTAAKKAPAKKPAAKKAPAKKALTDDQKAAARSEAAKKAAATRKANAIAKADAARKAKAGS*