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SCNpilot_expt_1000_bf_scaffold_1301_curated_26

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: 23775..24374

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigK n=1 Tax=Microbacterium barkeri RepID=UPI0002E04C4D similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 199.0
  • Bit_score: 303
  • Evalue 1.80e-79
ECF RNA polymerase sigma factor SigK {ECO:0000313|EMBL:KJQ55342.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.9
  • Coverage: 199.0
  • Bit_score: 304
  • Evalue 8.80e-80
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 199.0
  • Bit_score: 282
  • Evalue 1.40e-73

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Taxonomy

Microbacterium sp. SA39 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGCTGGTGGAGATGGTGATCGACGGCCTGGAAGTGCCGGAGGACGGTTCGGCGCGAGACAGCGCGGCCGACCTCCTGGTGCGCGTGGCCGCAGGCGACCGGCGTGCCTTCGCCGAACTGTACGACCTTCTCTCGCCGCGCGTGTTCGCCCTGATCCTGCGCGTGGTGGTGAACCGCTCGCAGAGCGAGGAGGTCCTCCAGGAGGTCTTCCTGGAGATCTGGCAATCCGCCGGACGCTTCGCTCCGAACAGAGGGCAGGGCAGGTCCTGGGTGCTCACCATCGCCCACCGCCGGGCCGTCGACAGGGTGCGGGCGTCGCAGTCGAGCAGCGATCGTGACGTGCGCGTCGGTGTGCGTGACCTCGATGCGGCCCGGGATGTCGTCGAGGAGGCGGTCGAGGCGCAGATCGAAGGCGAGCGGGTCGTGGCGGCGCTCTCGGCGCTGCCGGAGGCGCAGCAGGAAGCACTGATCCTGGCCTATTACGGGGGTTACAGTCAGACCGAGATCTCGGCTCTGACCGGCGCTCCGCTGGGAACGATCAAGACGAGGATGAGAGACGGGCTGACGCGGCTGCGCAGCGAACTGGGGGTGTCGACATGA
PROTEIN sequence
Length: 200
MLVEMVIDGLEVPEDGSARDSAADLLVRVAAGDRRAFAELYDLLSPRVFALILRVVVNRSQSEEVLQEVFLEIWQSAGRFAPNRGQGRSWVLTIAHRRAVDRVRASQSSSDRDVRVGVRDLDAARDVVEEAVEAQIEGERVVAALSALPEAQQEALILAYYGGYSQTEISALTGAPLGTIKTRMRDGLTRLRSELGVST*