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SCNpilot_expt_1000_bf_scaffold_864_curated_8

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(6098..6721)

Top 3 Functional Annotations

Value Algorithm Source
spermidine/putrescine ABC transporter substrate-binding protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000375D948 similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 207.0
  • Bit_score: 375
  • Evalue 3.00e-101
Spermidine/putrescine ABC transporter substrate-binding protein {ECO:0000313|EMBL:EYT60043.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 207.0
  • Bit_score: 375
  • Evalue 4.20e-101
spermidine/putrescine-binding periplasmic protein similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 207.0
  • Bit_score: 348
  • Evalue 1.60e-93

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Taxonomy

Microbacterium sp. UCD-TDU → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 624
GTGGGCCAGGCAGTCGACGCCTGGCTGCGCTGGGTGCCGCGCTGGGAGCCCGCCACGCACCGGGGGCGGGTCGCTCCGTGCCGCCGCTGCCTGGGGTCGCCGATCCTCTCCGCCGCGGGGATCGGAGGGAACGTCCCGCACGGGGTGCAGCACGGTCTGTCCACCCGCATCAAGGCGATCGTCGACCACGCCGTCGCGGAGTACACGGCGCGCAACCTGCCGATGCTGCAGGCCGAGCTCGACCATCAGGCCGACCGCAACCGCTCGCGCACGTACCGTCCCGCCGAGGGCCTGGACCCCGAGTACGAAGGGATGCCGCTGGACCCCGACCCGGTGCCGGGTGCGCCGTTCCTGTTCACCGTGGCGGGTCTCGCGGATGAGGCGTCCGCGGAGCTGCCGCCGCTGCCTCCGCTGAGCGACGAGGCGAAGGCCGCTCTGCGCCAGGAGGTCGCGCTCGCCGACGAGTACGCGAACATGATCGGTCGGGAGATCTGCGGCATCCTGCTGCGGCACCGGCTGAGCGTGCAGGCGGCGATCTCACAGTACGTCGAGCCGCAGATCGAGGCGATGCTGGCCGAGCTCAGCGAGGCGCTGGACTCGCCCTTCGATCCCGACTCCCCATAA
PROTEIN sequence
Length: 208
VGQAVDAWLRWVPRWEPATHRGRVAPCRRCLGSPILSAAGIGGNVPHGVQHGLSTRIKAIVDHAVAEYTARNLPMLQAELDHQADRNRSRTYRPAEGLDPEYEGMPLDPDPVPGAPFLFTVAGLADEASAELPPLPPLSDEAKAALRQEVALADEYANMIGREICGILLRHRLSVQAAISQYVEPQIEAMLAELSEALDSPFDPDSP*