ggKbase home page

SCNpilot_expt_1000_bf_scaffold_864_curated_16

Organism: scnpilot_dereplicated_Microbacterium_3

near complete RP 46 / 55 MC: 2 BSCG 45 / 51 MC: 2 ASCG 12 / 38
Location: comp(11534..11866)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KEH4_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 102.0
  • Bit_score: 174
  • Evalue 7.10e-41
PadR family transcriptional regulator {ECO:0000313|EMBL:EYT60046.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.6
  • Coverage: 110.0
  • Bit_score: 190
  • Evalue 1.30e-45
PadR-like family transcriptional regulator; K10947 PadR family transcriptional regulator, regulatory protein PadR similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 105.0
  • Bit_score: 99
  • Evalue 7.00e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. UCD-TDU → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 333
ATGACAGCGGACGTGGGGGCGCAGATGCGCAAGGGCGTGGTCGAGTACTGCGTGCTCGGCCTGCTCGCCCGCGAGCCGATGTACGGCTGGCAGCTCGCCGACGCGCTCACCGAGTCCGGGCTCATCGCCAGCATCGGCACCCTGTACCCGCTGCTCGGGCGGCTCCGCGACAACGGCTGGGTCACGACATTCGACCAGCCGTCGGACTCCGGTCCCGTGCGGCGGTACTACCGGCTCACGGCCGCCGGAGTCGCGCAGCTCGCGCTGTTCCGCACGCAGTGGCAGCCCTTCGCCCTGACCGTCTCACGCCTCGTGGGAGAGGAAACACCATGA
PROTEIN sequence
Length: 111
MTADVGAQMRKGVVEYCVLGLLAREPMYGWQLADALTESGLIASIGTLYPLLGRLRDNGWVTTFDQPSDSGPVRRYYRLTAAGVAQLALFRTQWQPFALTVSRLVGEETP*