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scnpilot_p_inoc_scaffold_1261_curated

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1261_curated_1
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..257)
DNA (255bp) protein (85aa)
Alpha/beta hydrolase fold containing protein n=2 Tax=Microbacterium RepID=H8E475_9MICO
Alpha/beta hydrolase {ECO:0000313|EMBL:EXJ50725.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
alpha/beta hydrolase fold protein
scnpilot_p_inoc_scaffold_1261_curated_2
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(254..1006)
DNA (753bp) protein (251aa)
bdhA; 3-hydroxybutyrate dehydrogenase (EC:1.1.1.30); K00019 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
3-hydroxybutyrate dehydrogenase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E474_9MICO
3-hydroxybutyrate dehydrogenase {ECO:0000313|EMBL:EXJ50724.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
scnpilot_p_inoc_scaffold_1261_curated_3
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(999..1676)
DNA (678bp) protein (226aa)
Regulatory protein TetR n=2 Tax=Microbacterium RepID=H8E473_9MICO
Regulatory protein TetR {ECO:0000313|EMBL:EIC08122.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
TetR family transcriptional regulator
scnpilot_p_inoc_scaffold_1261_curated_4
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1663..3225)
DNA (1563bp) protein (521aa)
AMP-dependent synthetase and ligase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
AMP-dependent synthetase and ligase n=2 Tax=Microbacterium RepID=H8E472_9MICO
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EIC08121.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
scnpilot_p_inoc_scaffold_1261_curated_5
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3248..4390)
DNA (1143bp) protein (381aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E471_9MICO
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EIC08120.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
scnpilot_p_inoc_scaffold_1261_curated_6
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4387..5262)
DNA (876bp) protein (292aa)
ABC-type transporter, integral membrane subunit n=2 Tax=Microbacterium RepID=H8E470_9MICO
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EIC08119.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
scnpilot_p_inoc_scaffold_1261_curated_7
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5259..5969)
DNA (711bp) protein (237aa)
ABC transporter related protein n=2 Tax=Microbacterium RepID=H8E469_9MICO
ABC transporter related protein {ECO:0000313|EMBL:EIC08118.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein
scnpilot_p_inoc_scaffold_1261_curated_8
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5966..6754)
DNA (789bp) protein (263aa)
ABC transporter related protein n=2 Tax=Microbacterium RepID=H8E468_9MICO
ABC transporter related protein {ECO:0000313|EMBL:EIC08117.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
livG; branched-chain amino acid transport ATP-binding protein LivG
scnpilot_p_inoc_scaffold_1261_curated_9
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6791..7999)
DNA (1209bp) protein (403aa)
Extracellular ligand-binding receptor n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E467_9MICO
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EIC08116.1}; Flags: Precursor;; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
ABC branched-chain amino acid transporter substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein
scnpilot_p_inoc_scaffold_1261_curated_10
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8151..8582
DNA (432bp) protein (144aa)
Regulatory protein MarR n=2 Tax=Microbacterium RepID=H8E466_9MICO
Transcriptional regulator {ECO:0000313|EMBL:EXJ50720.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
transcriptional regulator
scnpilot_p_inoc_scaffold_1261_curated_11
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8579..9814
DNA (1236bp) protein (412aa)
Major facilitator superfamily MFS_1 n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E465_9MICO
MFS transporter {ECO:0000313|EMBL:EXJ50719.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
permease of the major facilitator superfamily
scnpilot_p_inoc_scaffold_1261_curated_12
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10177..11016
DNA (840bp) protein (280aa)
archaeal fructose-1,6-bisphosphatase; K05602 histidinol-phosphatase [EC:3.1.3.15]
Inositol monophosphatase n=2 Tax=Microbacterium RepID=H8E464_9MICO
Histidinol phosphatase {ECO:0000313|EMBL:KIC57675.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
scnpilot_p_inoc_scaffold_1261_curated_13
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11035..11631
DNA (597bp) protein (199aa)
Nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein n=2 Tax=Microbacterium RepID=H8E463_9MICO
Nitrate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIC57676.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein
scnpilot_p_inoc_scaffold_1261_curated_14
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12452..13117
DNA (666bp) protein (222aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E9S0_9MICO
Neuraminidase {ECO:0000313|EMBL:KIC57678.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
neuraminidase; K09807 hypothetical protein
scnpilot_p_inoc_scaffold_1261_curated_15
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13242..13718)
DNA (477bp) protein (159aa)
SsrA-binding protein n=2 Tax=Microbacterium RepID=H8E9R9_9MICO
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
smpB; tmRNA-binding protein; K03664 SsrA-binding protein
scnpilot_p_inoc_scaffold_1261_curated_16
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13799..14713)
DNA (915bp) protein (305aa)
Cell division protein FtsX n=2 Tax=Microbacterium RepID=H8E9R8_9MICO
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
cell division protein; K09811 cell division transport system permease protein
scnpilot_p_inoc_scaffold_1261_curated_17
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14710..15825)
DNA (1116bp) protein (372aa)
Cell division ATP-binding protein FtsE n=2 Tax=Microbacterium RepID=H8E9R7_9MICO
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC57681.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
ftsE; ATPase; K09812 cell division transport system ATP-binding protein
scnpilot_p_inoc_scaffold_1261_curated_18
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15864..16643
DNA (780bp) protein (260aa)
Alpha/beta hydrolase fold containing protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E9R6_9MICO
Alpha/beta hydrolase {ECO:0000313|EMBL:EXJ51503.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
alpha/beta hydrolase
scnpilot_p_inoc_scaffold_1261_curated_19
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16544..17656)
DNA (1113bp) protein (371aa)
Peptide chain release factor 2 n=2 Tax=Microbacterium RepID=H8E9R5_9MICO
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
prfB; protein chain release factor B; K02836 peptide chain release factor 2
scnpilot_p_inoc_scaffold_1261_curated_20
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17694..18980
DNA (1287bp) protein (429aa)
Major facilitator superfamily MFS_1 n=2 Tax=Microbacterium RepID=H8E9R4_9MICO
Major facilitator transporter {ECO:0000313|EMBL:EXJ51505.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
permease of the major facilitator superfamily
scnpilot_p_inoc_scaffold_1261_curated_21
unknown

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19016..19144
DNA (129bp) protein (43aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1261_curated_22
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19111..19458
DNA (348bp) protein (116aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E9R3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC57685.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1261_curated_23
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19495..19920)
DNA (426bp) protein (142aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E9R2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KIC57686.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1261_curated_24
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19917..20402)
DNA (486bp) protein (162aa)
TadE family protein n=2 Tax=Microbacterium RepID=H8E9R1_9MICO
TadE family protein {ECO:0000313|EMBL:EIC06344.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1261_curated_25
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20377..20766)
DNA (390bp) protein (130aa)
TadE family protein n=2 Tax=Microbacterium RepID=H8E9R0_9MICO
TadE family protein {ECO:0000313|EMBL:EIC06343.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1261_curated_26
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20781..20960)
DNA (180bp) protein (60aa)
Uncharacterized protein n=2 Tax=Microbacterium RepID=H8E9Q9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC06342.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1261_curated_27
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21069..21995)
DNA (927bp) protein (309aa)
Type II secretion system F domain-containing protein n=2 Tax=Microbacterium RepID=H8E9Q8_9MICO
Type II secretion protein F {ECO:0000313|EMBL:KIC57784.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
conserved membrane protein, putative pilus assembly protein
scnpilot_p_inoc_scaffold_1261_curated_28
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21992..22849)
DNA (858bp) protein (286aa)
Type II secretion system F domain-containing protein n=2 Tax=Microbacterium RepID=H8E9Q7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ51512.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
conserved membrane protein, putative pilus assembly protein
scnpilot_p_inoc_scaffold_1261_curated_29
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22846..23991)
DNA (1146bp) protein (382aa)
Type II secretion system protein E n=2 Tax=Microbacterium RepID=H8E9Q6_9MICO
Flp pilus assembly protein, ATPase CpaF {ECO:0000313|EMBL:EXJ51513.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
putative ATPase, type II/type IV pathway secretion protein; K02283 pilus assembly protein CpaF
Displaying 29 items

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