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scnpilot_p_inoc_scaffold_870_curated_7

Organism: scnpilot_dereplicated_Microbacterium_7

near complete RP 45 / 55 MC: 4 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(4865..5977)

Top 3 Functional Annotations

Value Algorithm Source
integrase n=1 Tax=Leucobacter chromiiresistens RepID=UPI000262AED9 similarity UNIREF
DB: UNIREF100
  • Identity: 92.4
  • Coverage: 370.0
  • Bit_score: 711
  • Evalue 3.20e-202
Tyrosine recombinase XerC {ECO:0000313|EMBL:KJL23775.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 370.0
  • Bit_score: 698
  • Evalue 3.90e-198
putative tyrosine-family recombinase/integrase similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 350.0
  • Bit_score: 404
  • Evalue 3.40e-110

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Taxonomy

Microbacterium oxydans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1113
ATGCAAGATTTTGGGAGCTCTCCAGCCGCACTTCGACTGCTCACCTCGGCGTCGAACGTCGCTTTGGCGAACCCGGAGCAGCAGGTCTTCGACGCGATGATGGACGGCTGGCGGAATCAGCAGCTGTCGCGAGGGCTCCGTGAGCAGACCATCCAGAACCGCGTGGCGACGGTGGCCCGCTTCCGGGAGTTCGCGGACAAGCCGCCGTGGAAGTGGACGGTCGCTGACGTTGACGAGTTCACAAGGGAAGCCACCGATCGCAGGCTGGCGCTGTCCACTCTGCGTCACCACCATGGCGCAATCCGCGGGTTCTGCGACTACCTGACGAATCCGTTGTACGACTGGATGGAGATCTGCGAACGGGAGTTCGGCGAGATCCCGTCGCAGGTGTGCTTGCCATGGAACACGGTCGCGCATCGGTTTGAGTTCGAGGGCGACGGAAAGCGCCGGCCGTTCACCTACGACGAGGTGGAGCGCCTGTTCGACACCGCTGACGCCCGGGTTGAGTTGCTCGTGAGCTCGGGACGAAAAGGCGCGCTCGGGGCGCTGCGGGACGCGCAGCTGCTGAAGACGGTCTACGCGTTCGGGCTGCGCCGCACCGAGGTGGTGATGCTCGACACCGTCGACCTGCACCACAACGCCAAGATGCGCCAATGGGGACGCTACGGTGCGATCCACGTGCGGTGGGCGAAGGCGGCTGGCGGCGGCGCTCCTCGTCGTCGCACAGTGCTGCTGGTGCCGGAGTTCGACTGGTGGGTGCCGGGCATGCAGCAGTGGCTCGAACAGGCCCGGGAACGGTTTGCGCCCGGTGACGACCTCGACGCGCTCTGGGTGACCGAGCGACGCACCCGCCTGTCCGCCGGCTATCTCGACCGGAGGTTCGCGGAACTGCGGGACGAGGCCGGCCTGTCGAAGGATCTGACGCTGCACAGCCTCCGGCATTCCTACGTCACGCACCTGCTCGAGTTCGGCTACGCCGAGCGATTCGTGCAGGAGCAGGTCGGGCACATGCACGCGTCGACGACGTCGATCTACGCCTCCGTCAGTTCGGACTACAAGAACCGGGTGCTTGCAGAGGCATTGAAGGCCCTCATCGAAGGAGAAGCGGAATGA
PROTEIN sequence
Length: 371
MQDFGSSPAALRLLTSASNVALANPEQQVFDAMMDGWRNQQLSRGLREQTIQNRVATVARFREFADKPPWKWTVADVDEFTREATDRRLALSTLRHHHGAIRGFCDYLTNPLYDWMEICEREFGEIPSQVCLPWNTVAHRFEFEGDGKRRPFTYDEVERLFDTADARVELLVSSGRKGALGALRDAQLLKTVYAFGLRRTEVVMLDTVDLHHNAKMRQWGRYGAIHVRWAKAAGGGAPRRRTVLLVPEFDWWVPGMQQWLEQARERFAPGDDLDALWVTERRTRLSAGYLDRRFAELRDEAGLSKDLTLHSLRHSYVTHLLEFGYAERFVQEQVGHMHASTTSIYASVSSDYKNRVLAEALKALIEGEAE*