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scnpilot_p_inoc_scaffold_3213_curated_1

Organism: scnpilot_dereplicated_Microbacterium_7

near complete RP 45 / 55 MC: 4 BSCG 45 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 1..363

Top 3 Functional Annotations

Value Algorithm Source
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 120.0
  • Bit_score: 243
  • Evalue 1.90e-61
leuD; 3-isopropylmalate dehydratase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 120.0
  • Bit_score: 217
  • Evalue 1.90e-54
3-isopropylmalate dehydratase small subunit n=2 Tax=Microbacterium RepID=H8E4C3_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 120.0
  • Bit_score: 243
  • Evalue 1.40e-61

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Taxonomy

Microbacterium sp. oral taxon 186 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 363
CACGCCGTCTGGGCCCTGCGCGACTACGGCTTCCAGGTCGTGCTGAGCCCGAAGTTCGCCGACATCTTCCGGGGCAATGCGGGCAAGCAAGGCCTGGTCACCGGCGTGATCTCCGAGGCCGACGTGGAGGCCATCTGGGCCCAGATCGAGGCGCAGCCGGGGATCGAGATGACGGTCGACCTTCTCGAGCGCACGGCGGTGATCGGCGAGCTCCGGGTCTCGTTCGAGATCGACGATTACACTAGGTGGAGGCTCCTCGAAGGTCTGGACGACATCGGGCTGACTCTGCGCAATGAGGACAAGATCGCGCAGTTCGAGGCGCGCCGCGAGGCGTGGCGCCCGCGGACGCTCCCCGTTCGCTAG
PROTEIN sequence
Length: 121
HAVWALRDYGFQVVLSPKFADIFRGNAGKQGLVTGVISEADVEAIWAQIEAQPGIEMTVDLLERTAVIGELRVSFEIDDYTRWRLLEGLDDIGLTLRNEDKIAQFEARREAWRPRTLPVR*