ggKbase home page

scnpilot_p_inoc_scaffold_608_curated_1

Organism: scnpilot_dereplicated_Microbacterium_5

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 12 / 38
Location: comp(143..559)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 136.0
  • Bit_score: 171
  • Evalue 6.20e-40
Ribonuclease VapC n=1 Tax=Brevibacterium casei S18 RepID=K9B3R8_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 64.7
  • Coverage: 136.0
  • Bit_score: 161
  • Evalue 7.80e-37
twitching motility protein PilT; K07062 similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 139.0
  • Bit_score: 153
  • Evalue 3.90e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Tetrasphaera japonica → Tetrasphaera → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 417
GTGAAGTACCTGCTCGACACGAACATCATCAGCGATCACTACAAGGGAGTCTCTCCCGCGCTGGACAGATGGATGGACGCACAGGTCGAAGGCGATCTCGCCATCAGCGCGATCACCGTCCTCGAACTCGATCGCGGAGTACGTCAGCGCGAGCGCCGCGACCCCGCCCAGGGGGCCCGGCTTCGCCTGTGGCTCGACGACGCCGTGCGGCCTCTGTTCACCGGGCGCATCCTCGTCGTCGACGAACGCGTCGCCCTGGTGGCGTCTGGCCTGCATTCCCCTGATCGGATGCCCGACATGGACGCGCTTATCGCGGCGACCGCGCTTGTGCATGGACTGACGCTCGTGACGCGCAACCTTCGGGATATGGAACGCACGGGCGCCGCACTGCTGAACCCGTGGGATCTCGCCGGGTGA
PROTEIN sequence
Length: 139
VKYLLDTNIISDHYKGVSPALDRWMDAQVEGDLAISAITVLELDRGVRQRERRDPAQGARLRLWLDDAVRPLFTGRILVVDERVALVASGLHSPDRMPDMDALIAATALVHGLTLVTRNLRDMERTGAALLNPWDLAG*