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scnpilot_p_inoc_scaffold_1271_curated_1

Organism: scnpilot_dereplicated_Microbacterium_5

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 12 / 38
Location: 3..2762

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 919.0
  • Bit_score: 1761
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase, beta' subunit/160 kD subunit; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 93.5
  • Coverage: 919.0
  • Bit_score: 1690
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=2 Tax=Microbacterium RepID=H8E542_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 919.0
  • Bit_score: 1753
  • Evalue 0.0

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2760
ATGCTGCAGGAGGCCGTCGACGCGCTGTTCGACAACGGCCGCCGTGGTCGCCCCGTCACCGGTACCGGCAACCGTGCCCTGAAGTCGCTGTCCGACATGCTCAAGGGCAAGCAGGGCCGCTTCCGTCAGAACCTGCTCGGCAAGCGCGTCGACTACTCGGGCCGCTCGGTCATCATCGTCGGTCCGCAGCTGAAGCTGCACCAGTGTGGTCTGCCCAAGCAGATGGCGCTCGAGCTCTTCAAGCCGTTCGTGATCAAGCGCCTGATCGACCTCGGTCACTCGCAGAACATCAAGGCCGCCAAGCGCGCCGTCGAGCGCACGCGTCCCGAGGTCTGGGACGTGCTCGAGGAGATCATCCGCGAGCGCCCCGTGCTGCTGAACCGTGCACCCACGCTGCACCGCCTCGGCATCCAGGCCTTCGAGCCTCAGCTCGTCGAGGGCAAGGCCATCCAGCTGCACCCGCTCGTGTGTGCGGCGTTCAACGCCGACTTCGACGGTGACCAGATGGCCGTGCACCTGCCGCTGTCGGTCGAGGCTCAGGCCGAGGCCCGCGTGCTGATGCTCGCGTCGAACAACATCCTCAAGCCGTCTGACGGCCGCCCGGTCACCCTGCCCTCGCAGGACATGATCATCGGCCTGCACCACCTGACCACGGTCAAGGAGGGTGCTGCCGGTGAGGGTCGCGTGTTCGGTTCGGTCGGCGAGGCGATCCTGGCCAAGGACGAGGGCACCCTCGACCTGCAGGCCAAGGTCCGCATCCGCATCCCGGGTCTGTCGTTCCTCGAGGGCGAAGCGCCCGAGGGCTACGACCGTCACGGCCTCGTGGACGCGTCGCTCGGTCAGGCGATCTTCAACGACACGCTGCCCAAGGGCTACCCGTTCGTGCGCGAGCAGGCTGACAAGGGCAAGCTGTCGCAGATCGTCAACAAGCTCGCCGAGGAATACCCCAAGGTCGAGGTCGCCGCGTCGCTTGACCGCATCAAGGATGCCGGGTTCTACTGGGCCACGCGCTCGGGCGTCACGGTCGCACTGAGCGACATCCTGACCCCGCCGAACAAGGGCGAGATCATCGCCAAGTTCGAGCAGCAGGCGCAGAAGGTCCAGGGCCAGTTCGAGAAGGGTCTCGTGACCGACGCCGAGCGTCGTCAGGAGCAGATCAAGATCTGGACCGAGGCGACCGACGAGGTGCAGGCCGCGATGAAGGCCAACTTCCCCGCCGACAACACCATCAACCGCATGGTGAGCTCGGGCGCCCGTGGTAACTGGCTGCAGATCCGCAACATCGCGGGCATCCGAGGCCTGGTCAACAACACCAAGGGTGAGATCATGCCCCGCCCGATCATCTCCTCGTACCGCGAGGGGCTGTCGGTTGCGGAGTACTTCACCGCGACGCACGGTGCCCGTAAGGGTCTGGCCGACACGGCCCTCCGTACCGCCGACTCGGGTTACCTGACGCGACGCCTCGTCGACGTCTCGCAGGATGTCATCATCCGCGAGGACGACTGTGGCACGACGAAGGGCCTCGAGTTCACGATCGCCGCTCCGAATGCCACCGGCACGCTGGTGCGCGACGCGAACGTCGAGAACTCGGTGTTCGCCCGTACCCTGGCGGCCGACGTGGTCGCGCCGTCGGGCGAGGTCGTGGCATCCGCCGGTGACGACGTGGGTGACGTGCTCATCGACAAGCTCGTCGAGGCCGGCGTCGAGACCATCAAGGTCCGCTCGGTGCTCACGTGTGACTCGGCGGTCGGCGTCTGCGCGAAGTGCTACGGCCGTTCGCTCGCGACCGGCAAGCTCGTCGACATCGGTGAGGCCGTCGGCATCATCGCGGCCCAGTCGATCGGTGAGCCCGGCACGCAGCTGACGATGCGTACCTTCCACACAGGTGGTTCGGCTTCTGCCGACGACATCACCCAGGGTCTGCCGCGTGTGCAGGAGCTGTTCGAGGCCCGTACCCCCAAGGGTGCGTCCCCGATCGCCGAGGCTGACGGTCGCATCACGATCGATGAGACCGACAAGGCGAAGAAGGTCATCCTCACGCCCGACAACGGCGACGAGCCGCACGTCTACCCGGTGCTCAAGCGCGCCACGCTGCTGGTCGAGGACGGCCAGCACGTGACGGTCGGCCAGCCGATCCTGGTGGGCACGCTCGACCCCAAGGAGGTCATGCGTGTGCAGGGTGCCCGCGAGGTGCAGAAGTACCTCGTCGGCGGCGTGCAGGGCGTGTACCGCTCGCAGGGTGTGCCGATCCACGACAAGCACATCGAGGTCATCGTCCGTCAGATGCTGCGGAAGGTCACCGTGGTCGACCACGGCGACACGACGCTGCTGCCGGGTGAGCTGGTCGACTTCAAGCGCTACCAGCAGATCAACCGCGAGGCAGTCGCCGAGGGCAAGCGCCCCGCGTCGGGTCGTCCCGAGCTGATGGGTATCACGAAGGCGTCGCTCGCGACCGAGTCGTGGCTGTCGGCCGCGTCGTTCCAGGAGACCACCCGCGTTCTGACGCAGGCGGCCATGGAGGGCAAGAGCGACCCGCTCGTCGGCCTCAAGGAGAACGTCATCATCGGAAAGCTCATCCCCGCCGGAACCGGTCTTGCGAAGTACCGCAACGTCACGGTCGAGGCGACGGAAGAGGCCAAGAGCGAGCGGTACCCCAACCGCATCTTCGCCTCGGACGGCGCCTACAGCGACGCCGACCTGAGCTACGTCGACTTCGACAGCTTCTCGACGGACGACTTCACGCCCGGTACGTACAACTGA
PROTEIN sequence
Length: 920
MLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLHQCGLPKQMALELFKPFVIKRLIDLGHSQNIKAAKRAVERTRPEVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQMAVHLPLSVEAQAEARVLMLASNNILKPSDGRPVTLPSQDMIIGLHHLTTVKEGAAGEGRVFGSVGEAILAKDEGTLDLQAKVRIRIPGLSFLEGEAPEGYDRHGLVDASLGQAIFNDTLPKGYPFVREQADKGKLSQIVNKLAEEYPKVEVAASLDRIKDAGFYWATRSGVTVALSDILTPPNKGEIIAKFEQQAQKVQGQFEKGLVTDAERRQEQIKIWTEATDEVQAAMKANFPADNTINRMVSSGARGNWLQIRNIAGIRGLVNNTKGEIMPRPIISSYREGLSVAEYFTATHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREDDCGTTKGLEFTIAAPNATGTLVRDANVENSVFARTLAADVVAPSGEVVASAGDDVGDVLIDKLVEAGVETIKVRSVLTCDSAVGVCAKCYGRSLATGKLVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASADDITQGLPRVQELFEARTPKGASPIAEADGRITIDETDKAKKVILTPDNGDEPHVYPVLKRATLLVEDGQHVTVGQPILVGTLDPKEVMRVQGAREVQKYLVGGVQGVYRSQGVPIHDKHIEVIVRQMLRKVTVVDHGDTTLLPGELVDFKRYQQINREAVAEGKRPASGRPELMGITKASLATESWLSAASFQETTRVLTQAAMEGKSDPLVGLKENVIIGKLIPAGTGLAKYRNVTVEATEEAKSERYPNRIFASDGAYSDADLSYVDFDSFSTDDFTPGTYN*