ggKbase home page

SCNpilot_cont_300_bf_scaffold_173_curated_30

Organism: scnpilot_dereplicated_Microbacterium_2

near complete RP 51 / 55 BSCG 50 / 51 MC: 3 ASCG 11 / 38
Location: comp(28155..30977)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B38D30 similarity UNIREF
DB: UNIREF100
  • Identity: 42.3
  • Coverage: 948.0
  • Bit_score: 642
  • Evalue 6.00e-181
Putative Transcriptional regulator, winged helix family {ECO:0000313|EMBL:CCH77462.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.1
  • Coverage: 958.0
  • Bit_score: 550
  • Evalue 4.30e-153
winged helix family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 38.4
  • Coverage: 956.0
  • Bit_score: 491
  • Evalue 7.00e-136

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Tetrasphaera japonica → Tetrasphaera → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2823
ATGCGGGTGCGCGACCTCGGACTGCTGAGCGTCGAGGTCGACGGCGTCGAGCAGCCGCTGCGCGGTCGGCGCCCGCAGTTCATCCTCGCCCGCCTGCTCGTGAGCGTGAATCAGCGGGTCACCGCATCCGAGCTCGTGGAGGCGGTGTGGGGTGACGACCTCGCGGATCACACGTCCACGCTCGAATCGCACGTCTGGCGCCTGAGGCAGACGCTCGAACCGCGCCGCGCCGCACGACAGCCGGCACGGGTCCTGATCACGGATGTCGACGGCTACCGGCTTCTCGCGCGGATCGAGGACGTGGACTCGCTCCGCTTCGAGCGGGATGCGGGGGAGATCCGCGAGCTCACCGCGACCGCGGATCCCGGGCGCGTGCTGCAGCAGTGCGACGACGCCCTCGCCCTGTGGAGCGGAGACCCGTTCGCGCCGGCCTCGGACGAAGTGTGGGCGAGCGCCGCGGTCGCCCGCCTGCGGGAGATGCACACGGAGATCGCCGCGACCAGGGTGGACGCCCTCCTCGACCTCGATCAGAACGAGCGGGCGCTCGCCGACCTGGAGCGCCTGATCGCTCGGGCGCCTCTGCACGAGCGCTTCTGGACGCAGCGGATGCTGGCGCTGCACCGCGCCGGCCGCACCGATCAGGCGCTCGAGGCGTACCAGCGGCTCCGCCGCCTGCTCGACGACGAACTCGGGCTCGAACCCGGCGTCGAGGTGGACGACCTGCACCACCGCATCCTCGACCGCGACCCGACCCTCGTGACGAGGCAGACCGTCATCGCCGCCTCGGCGGACGCGATCCGGCCGCTCATGCGGCTGCCGCACAGGACGACATCCCTCGTCGGACGGGCCGGCGAGCTGGAGCGCATCGCGCGACTCGTGGCCGGTCACCGACTCGTCACCCTCACCGGGATGGGGGGCTGCGGCAAGACCCGTCTGGCGGTAGAGGTCGCCTACACCGTGGCGGGCGACTTCCCCGACGGGGTGGTGTTCGTCGACCTCGCCACGATCGAAGACGAATCCATGGTCGCGGAGGTCGTCGCGTCCACGCTGCGGCTCGCGCCGGCCGTCGTCGGCTCCGCCGTCGACTCCACCGTCGACCACCTTCGCCGACGACGGATGCTCCTCGTGCTCGACAACTGCGAGCACGTGATCTCCGGTGCGGCCGAGTTCGTCGAGCAGCTCGCCGACGACGATGCCCGCTGCACCGTACTGCTCACCAGCCGTGAGGCCGTCTCCTTTCCCGGCGAGGTGATCTGGACGCTCGGCCCTCTTCCGCTGGCGGCCGCATCCACCGAGGAGCCGTCTCCCGCGGTCGAACTCCTCCTCGCGCGTCTCTCCGAAGCCGTGCCCGACCTCGAGATCGATGATCACGTCCGCGCCCAGGCGGTGCGGCTCTGCGCCGCCGTCGACGGCCTCCCGTTGGCCATCGAGCTCGCCGCCGCCCGCGTGCGCACCGATGGCCTGGAGGCCGTCGTCGCACAGGCGGCGACCGATCCGAGCGGGCTGAGGCGGCTGGGGAGCACGCGCGCGGCTCACTACGACAGCCTCGCCGACGCGGTGGAGTGGAGCTATCGCACTCTGACCGACGATGAGCGAATACTGCATCGTCGGCTCGCGGTCCTCCCGGGGCCGTTCAGCGCCGACGCGGCAGCGGCCCTCGCGGCTCCCCTCGACGGCGCCGTTCCCGGTGTGCCCGCCGCCGCGGTGCCCGACCTGCTCGCGCTCCTCACCCACCGCTCCCTCCTCTTGCCCGTCCCCGCGTCGAGGTCGCAGGGTCGGATGCGGTTCCGCCAACTGGCGACCGTCCGCTCGCATGCGCGGCGGGCGCTGAACGTGGCGGGCGAGACAACGGCGGCAGAGCACGCCCGCGACGAGTGGGTGGGCGCGCTCGTCGCCGCGCGGCCCCGCATCTTCGGCGCCGACCCCGCGGGCTGGCACGACGCCGTCGACGACGACTTCGACGCCGTTCGCAGCGCACTGCATCGGATGCTCGTCGAGGAGCCTGCGCCCGAGGGGGCAGCGCTCGTCACCGGGCTGGGCGGGTACTGGTACCTGCGCCGCCGTCTCGTCGAAGGGCTCAGCTGGCTGGAGCTCGCGGAAGGTGTGCGGGGCGTCGACGCGGTCGACACGGCGGGCGTGCACTGCGCTCTCGCCGTCCGGTATGTCCTGCAGGGTCGCAGCGACCTGGCGCTTCCCCACATCGAGCGCGCCCGCGCCGGATCGGCCCTTCCCGCAGGATCGCCTCGGTCCGCGGAGCTTGCGTGGGCGCTCGCCGGCCTCGCCTACGCGCTGCTCACCGGCTCCGAGTCCGACCTGGTCGCGACCATCACTCGCGACGTGCGCGCCGCCGCCGCCGCGCTGGGTGATGTCGACCTCGTCGTCGTCGCGGACGCGCTGTCGGCGGCGACCGCGCCGCGGCCGAACCCCACCGAGGTGCTCGCGGTGTACGAGCGCGCGTCGGTCCAGGACAACACCTTCGCGCTCGCCATCTGTGCGTCGTTCTTCAGCCTGTACGCGCTGCTCACGACCGATCCTGCGCTCGGCGAGTTGTGGGTGGGCCGGGGCCGCGAGCTCCACGCGCGGATCGGCGGGCGGGCTTTCAGCGGCTTCGATGAGAATCGCGCCGACTTCGCCGCGATGGCGGGGGAGTACGCGGCGGCGGCGAGGCTCTACGGCGCGTCGAGTTCGGCGGCGTTCCAGGACGGGACGGTCTGGCCCAGGCAGCCCGCGACGCGGGAGCTGCTCCGACGCACCGAGGAGGCCCTTGCGCGCGAGGAGTTCCGTCGAGCCTGGCGTGCGGGCGAGGAGCACCGGAGCGCGTAG
PROTEIN sequence
Length: 941
MRVRDLGLLSVEVDGVEQPLRGRRPQFILARLLVSVNQRVTASELVEAVWGDDLADHTSTLESHVWRLRQTLEPRRAARQPARVLITDVDGYRLLARIEDVDSLRFERDAGEIRELTATADPGRVLQQCDDALALWSGDPFAPASDEVWASAAVARLREMHTEIAATRVDALLDLDQNERALADLERLIARAPLHERFWTQRMLALHRAGRTDQALEAYQRLRRLLDDELGLEPGVEVDDLHHRILDRDPTLVTRQTVIAASADAIRPLMRLPHRTTSLVGRAGELERIARLVAGHRLVTLTGMGGCGKTRLAVEVAYTVAGDFPDGVVFVDLATIEDESMVAEVVASTLRLAPAVVGSAVDSTVDHLRRRRMLLVLDNCEHVISGAAEFVEQLADDDARCTVLLTSREAVSFPGEVIWTLGPLPLAAASTEEPSPAVELLLARLSEAVPDLEIDDHVRAQAVRLCAAVDGLPLAIELAAARVRTDGLEAVVAQAATDPSGLRRLGSTRAAHYDSLADAVEWSYRTLTDDERILHRRLAVLPGPFSADAAAALAAPLDGAVPGVPAAAVPDLLALLTHRSLLLPVPASRSQGRMRFRQLATVRSHARRALNVAGETTAAEHARDEWVGALVAARPRIFGADPAGWHDAVDDDFDAVRSALHRMLVEEPAPEGAALVTGLGGYWYLRRRLVEGLSWLELAEGVRGVDAVDTAGVHCALAVRYVLQGRSDLALPHIERARAGSALPAGSPRSAELAWALAGLAYALLTGSESDLVATITRDVRAAAAALGDVDLVVVADALSAATAPRPNPTEVLAVYERASVQDNTFALAICASFFSLYALLTTDPALGELWVGRGRELHARIGGRAFSGFDENRADFAAMAGEYAAAARLYGASSSAAFQDGTVWPRQPATRELLRRTEEALAREEFRRAWRAGEEHRSA*