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SCNpilot_cont_1000_bf_scaffold_253_curated_23

Organism: scnpilot_dereplicated_Microbacterium_1

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 26343..27332

Top 3 Functional Annotations

Value Algorithm Source
transcription elongation factor NusA n=1 Tax=Microbacterium RepID=UPI00035DED39 similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 329.0
  • Bit_score: 581
  • Evalue 7.50e-163
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 329.0
  • Bit_score: 633
  • Evalue 2.30e-178
nusA; transcription elongation factor; K02600 N utilization substance protein A similarity KEGG
DB: KEGG
  • Identity: 86.6
  • Coverage: 329.0
  • Bit_score: 564
  • Evalue 1.80e-158

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Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 990
GTGGACATCGATCTCGGACTGCTGCGCACCGTGGAGCGCGAGCGGGAGATTCCGTTCGAGGAGCTCGTCTCGATCATCGAGCAGGCGATCCTCACGGCGTACGCGAAGAACAGCACGCCCACCGGCGTCCTCCCCGACGGCGCTCGCGCCCAGATCGACCGCAAGACCGGTCACGTCGCGGTGTTCGTGCCGCTGCGCGACGACGAGGACGCGGTGATCGGCGAGGAGGAGGTCACGCCCGACGACTTCGGTCGCATCGCCGCCTTCGCCGCCAAGCAGGTCATCAGCCAGCGGCTGCGTGACATCGCCGACGACGCGGTGCTGGGGGAGTTCCGCGGCAAGGAGGGCGACATCGTCGCCGGCGTCATCCAGCAGGGCCCGAACCCCCGCATGGTGCACGTCGACCTCGGCACGGTCGAGGCGATCCTTCCGCCCGAGGAGCAGGTGCCCGGCGAGGACTACGCCCACGGCTCGCGCATCCGCGTCTACGTCACGAGCGTCTCGAAGGGCACCAAGGGGCCCGCGATCACCGTCTCCCGCACGCACCCCGGCCTGGTGCGCAAGCTGTTCGCCCTCGAGGTCCCCGAGATCGCGTCGGGCGTCGTCGAGATCGTCTCGCTCGCGCGCGAGGCGGGTCACCGCTCGAAGATCGCGGTTCGCGCGAACGACCCGGCGATCAACGCCAAGGGTGCGTGCATCGGCGAGCTCGGCCGCCGCGTGCGCGCCGTCACGGAGGAGCTGGGCGGCGAGAAGATCGACATCGTCGACTACGACGCCGACCTCGCATCCTTCGTCGCGAAGGCGCTCTCGCCCGCCAAGGTCACCTCGAGCTTCGTGCTCGACGCGGGGACCAAGGCCGTGCGCGCCCTCGTTCCCGACTACCAGCTGTCTCTCGCGATCGGCAAGGAGGGCCAGAACGCCCGACTCGCCGCGAAGCTCACCGGGGCGAAGATCGACATCCAGCCCGACAGCATCCTCGAGGAGAGCTGA
PROTEIN sequence
Length: 330
VDIDLGLLRTVEREREIPFEELVSIIEQAILTAYAKNSTPTGVLPDGARAQIDRKTGHVAVFVPLRDDEDAVIGEEEVTPDDFGRIAAFAAKQVISQRLRDIADDAVLGEFRGKEGDIVAGVIQQGPNPRMVHVDLGTVEAILPPEEQVPGEDYAHGSRIRVYVTSVSKGTKGPAITVSRTHPGLVRKLFALEVPEIASGVVEIVSLAREAGHRSKIAVRANDPAINAKGACIGELGRRVRAVTEELGGEKIDIVDYDADLASFVAKALSPAKVTSSFVLDAGTKAVRALVPDYQLSLAIGKEGQNARLAAKLTGAKIDIQPDSILEES*