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SCNpilot_cont_1000_bf_scaffold_253_curated_30

Organism: scnpilot_dereplicated_Microbacterium_1

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: 34159..35070

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 303.0
  • Bit_score: 562
  • Evalue 2.70e-157
pseudouridine synthase; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 293.0
  • Bit_score: 414
  • Evalue 2.70e-113
tRNA pseudouridine synthase B n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AFD9_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 305.0
  • Bit_score: 428
  • Evalue 4.40e-117

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Taxonomy

Microbacterium ginsengisoli → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGGCCGCCGACGTCGCCTCGCCGTCGGGCATCCTCCTCGTCGACAAGCCGCAGGGCATCACGAGCCACGACGTCGTCTCCCGTGCCCGTCGCGCGCTCGCGACCCGGAAGATCGGTCACGCGGGCACGCTCGACCCCATGGCGACAGGCCTGCTCGTGCTCGGCGTCGGCAGCGCGACCCGACTGCTCACCTACCTCGTCGGGCTCGACAAGACCTATGAGGCGACCATCCGGCTCGGCGAGTCGACCGACAGCGACGATGCCGACGGCGTGCGCACGGCGGTCGCCGATCCGGCGGCGATCGCTGCCGTGACGGATGCCGCGGTGCAGGCCGGGATCGCCCGGCTCACCGGGGAGATCGACCAGGTGCCGAGCACCGTGTCGGCGATCAAGGTCGCCGGTCGTCGCGCCTACGACCTGGCGCGGGCCGGGGAGGAAGTCGTGCTCGCCTCTCGGCGGGTCACGATCTCCCGGTTCGAGGTCATCGCCCTGTGCCGCACGGAGGGCGTCATCGACCTCGACGTCGTGGTGGACTGCTCGAGCGGCACATACATCCGTGCCCTCGCGCGCGACCTCGGCGCCGCCCTCGCGGTGGGCGGGCATCTGACGGCGCTGCGGCGTACCCGCATCGGCTCGTTCGACGTCGCGGATGCGGCATCCGCCGATGACATCGCCCCCGCGCGCCTCGTGCCCGCCGCCGACGTCGCGGCGGCCGTGCTGGGGGCGCTGCCGGTGACGGCCGACGAAGCCCGCGATCTGCGCCACGGAAAGCGGCTCGAGGGGGCGGCCGACCGGCTCGGCGGGGCCGTGCGCGCCGCCATCGCCCCCGACGGGGTGCTCGTCGGCATCGTCGAACGTCGGGGCGCCGACATCAAGAGCGCGATGAACATGCCCGAGGAGGCATCCGCATGA
PROTEIN sequence
Length: 304
MAADVASPSGILLVDKPQGITSHDVVSRARRALATRKIGHAGTLDPMATGLLVLGVGSATRLLTYLVGLDKTYEATIRLGESTDSDDADGVRTAVADPAAIAAVTDAAVQAGIARLTGEIDQVPSTVSAIKVAGRRAYDLARAGEEVVLASRRVTISRFEVIALCRTEGVIDLDVVVDCSSGTYIRALARDLGAALAVGGHLTALRRTRIGSFDVADAASADDIAPARLVPAADVAAAVLGALPVTADEARDLRHGKRLEGAADRLGGAVRAAIAPDGVLVGIVERRGADIKSAMNMPEEASA*