ggKbase home page

SCNpilot_expt_300_bf_scaffold_0_curated_16

Organism: scnpilot_dereplicated_Micrococcales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38
Location: comp(15422..16222)

Top 3 Functional Annotations

Value Algorithm Source
Putaive rRNA methyltransferase id=7719153 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 267.0
  • Bit_score: 509
  • Evalue 2.20e-141
putative rRNA methyltransferase; K03437 RNA methyltransferase, TrmH family similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 266.0
  • Bit_score: 413
  • Evalue 4.00e-113
Putaive rRNA methyltransferase {ECO:0000313|EMBL:CAN02071.1}; TaxID=443906 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 266.0
  • Bit_score: 413
  • Evalue 1.80e-112

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 801
ATGATCGACAACCCTCGTTCGCCGCGCGTGCGCGCCGTGGCGAAGCTCGCGAAGCGGGATGCCCGCTCCGAGACGGGGCTGTTCCTCCTCGAGGGCCCGCAGGCCGTGTCCGAGGCCCTCACCTACCGCGCGGACCTCCTCGTCGAGCTGTTCGCGACGCCCACGGCCCTCGAGCGGCACGCCGACATCGCCAAGTCCGCCGCAGAGTCGGGCATCACGGTCGAGTTCGTCACCGAGGTCGTGCTCGACGCCATGGCCGACACCGTCACGCCCCAGGGCATCATCGCGGTGTGCCGCCAGTTTCCGACCTCGCTCAAAGACATCCTCGCCTCGGGTCCGCGCCTCATCGCGATCCTCGAGGAGGTGCGAGACCCGGGCAACGCCGGCACGATCATCCGCGCCGCCGACGCCGCGGGGGCGGACGCCGTCATCCTCTCGGGGCGCTCCGTCGACCTCTACAACCCCAAGGTCGTGCGCGCCACGACGGGGTCGCTCTTCCACCTGCCCGTCGCCGTCGGCTCGGAGCTCGAGCTCGTGGTCGAGAAGGCCAAGGGTGCGGGCCTGCAGGTCATCGCCGCCGACATCAAGGGCGCAGACCTGCTCGCCGCGCGTAAGGCCGGCGCGCTCGCCGCGCCCACCGCGTGGCTGTTCGGCAACGAGGCCCGCGGGCTGAGCGACGCGCACTACGCGCTCGCCGACTGGGTCATCACGGTGCCCATCTACGGCCACGCCGAGTCGATGAACCTCGCGACCGCCGCGTCGGTCTGCCTGTACGAGAGCGCCTTCGCCCAACGCAGCTAA
PROTEIN sequence
Length: 267
MIDNPRSPRVRAVAKLAKRDARSETGLFLLEGPQAVSEALTYRADLLVELFATPTALERHADIAKSAAESGITVEFVTEVVLDAMADTVTPQGIIAVCRQFPTSLKDILASGPRLIAILEEVRDPGNAGTIIRAADAAGADAVILSGRSVDLYNPKVVRATTGSLFHLPVAVGSELELVVEKAKGAGLQVIAADIKGADLLAARKAGALAAPTAWLFGNEARGLSDAHYALADWVITVPIYGHAESMNLATAASVCLYESAFAQRS*