ggKbase home page

SCNpilot_expt_300_bf_scaffold_0_curated_29

Organism: scnpilot_dereplicated_Micrococcales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38
Location: comp(24207..25148)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator id=7719166 bin=CNBR_ACT species=Microbacterium testaceum genus=Microbacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 314.0
  • Bit_score: 601
  • Evalue 3.90e-169
LysR family transcriptional regulator {ECO:0000313|EMBL:EYT60197.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.5
  • Coverage: 312.0
  • Bit_score: 532
  • Evalue 4.10e-148
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 85.0
  • Coverage: 313.0
  • Bit_score: 520
  • Evalue 3.60e-145

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. UCD-TDU → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 942
ATGGCACAGGGATCGAGCGGCATCGCGCTGCAGCACCTCCGCTACTTCATCGAGGTCGCTGCGGAGAGCTCGATCAGCGCCGCTGCCGACCTGCTGTACGTGGCCCAGCCGACGATGTCCGCGGCGATGAAAGACCTCGAGACGCGCGTCGGGCGCGACCTGCTCGTCCGCTCGCCGCGCGGGGTCACCCTCACCGCCGACGGCACGGAGTTCCTGGGCTACGCGAGGCAGGTCGTCGAGCAGGTGGCCCTGCTCGAGCAGCGCTACCTCGGCAGGCCGCCGTCGCGGCGCCTGCTCGGAGTCTCGGCGCAGCACTACTCGTTCGCCGTGGACGCGTTCGTGCGCATGGTGCGGGGCAGCGACGCCGCCGAGTACGAGTTCTCGCTGCGCGAGACGCGCACGTGGGACATCATCGAGGATGTCCGCGCGCTGCGCAGCGAGCTCGGCATCCTCTACCGCAACGACTTCAACCGCAAGATCATCGACAAGCTGCTGCGCGACGCCGGGCTCGTCTTCCGACCGCTGTTCCTGGCCCAGCCGCACATCTTCGTCTCGCGCAAGAACCCGCTCGCCTCGCGCGACCGCGTCACGCTCGCGGATCTCGCCGACCTGCCGCGGCTGACCTTCGACCAGGGCGTCAACAACTCCTTCTACCTCGCCGAGGAGATCCTCTCCACCCTCTCGAGCGCGCGGGAGATCCGGGTGTCCGACCGGGCCACGATCTTCAGCCTCATGATCGGCCTCGACGGGTACACGATCTCAACGGGAATGATCAGCGACGACCTCGACCCCGAGATCGTCGCCATCCCGCTCGACGTCGACGAGAGCATCGAGATCGGCTGGATCGGCCACTCGGCGATACCGCTCACCGAGCAGGCCCAGCGCTACCTCGCGGAGCTGCGGGCCGTCGTCACCGAGTTCGGGCTCGAGCTGCTCGACTGA
PROTEIN sequence
Length: 314
MAQGSSGIALQHLRYFIEVAAESSISAAADLLYVAQPTMSAAMKDLETRVGRDLLVRSPRGVTLTADGTEFLGYARQVVEQVALLEQRYLGRPPSRRLLGVSAQHYSFAVDAFVRMVRGSDAAEYEFSLRETRTWDIIEDVRALRSELGILYRNDFNRKIIDKLLRDAGLVFRPLFLAQPHIFVSRKNPLASRDRVTLADLADLPRLTFDQGVNNSFYLAEEILSTLSSAREIRVSDRATIFSLMIGLDGYTISTGMISDDLDPEIVAIPLDVDESIEIGWIGHSAIPLTEQAQRYLAELRAVVTEFGLELLD*