ggKbase home page

SCNpilot_expt_300_bf_scaffold_0_curated_36

Organism: scnpilot_dereplicated_Micrococcales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38
Location: comp(30921..31829)

Top 3 Functional Annotations

Value Algorithm Source
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.6
  • Coverage: 302.0
  • Bit_score: 394
  • Evalue 1.30e-106
miaA; tRNA dimethylallyltransferase (EC:2.5.1.75) similarity KEGG
DB: KEGG
  • Identity: 65.5
  • Coverage: 304.0
  • Bit_score: 351
  • Evalue 2.80e-94
tRNA dimethylallyltransferase id=7719173 bin=CNBR_ACT species=marine actinobacterium PHSC20C1 genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 303.0
  • Bit_score: 594
  • Evalue 7.90e-167

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine actinobacterium PHSC20C1 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 909
GTGCCGCGGCTCGTCGTCATCGTCGGTGCGACGGGCACGGGCAAGTCCGACCTCTCGCTGTCGCTCGCCGAGGGCCTCGCGCGCGAGGGCCACGCTGCCGAGATCGTGAACGCCGACGCCATGCAGCTCTACCGCGGCATGGACATCGGCACGGCCAAGCTCGCGCCCGGGGAGCGCCGGGGCATCCCGCACCACCTCCTCGACGTGCTCGACCCCGCCGAGGAGGCGAGCGTCGCCGACTACCAGGCGCTCGCGCGCGCGGCGATCGAGGATGTCGAGGCGCGCGGCAACGTGCCCGTGCTCGTGGGGGGTTCCGGCCTGTACGTGTCCGCCGTCGTGCAGGACTTCCGGTTCCCGGGCACCGACGCGGACGTGCGCGCGCGGCTCGAGGCGGAGCTCGAGGGCGGAGGGCCGGGCATCCTCTACCGCCGCCTCCTCGAGCTCGACCCGGGTGCCGCCACGGCGATCGGGCCGCACAACGGGCGGCGCCTCGTGCGGGCGCTCGAGGTCGTCGAGATCACGGGGGAGCCCTTCGGGTCGGGGCTGCCCGAGGACGCGGCGCCGTGGCGGCAGGCCACGATCCTCGCGCTGCGCGCGCCCCGCGAGGAGCTCGTGCGGCGCCTTGACGAGCGCGTGGTCGGGATGTGGGCGGCGGGCATCCTCGACGAGGTGCGGGGCCTGGGCGCCCTCGGGGTCACCGCGAGCCGCGCCATCGGCTACGCACAGGCGCTCGCGCAGCTCGCGGGGGAGCTCGACGAGCAGCAGGCCGTCGAGCAGACGCAGTCGCTCACGCGCCGCTACGCGCGGCGGCAGGTGGGCTGGTTCCGCCGCTACGACGCGCACTGGCTCGACTTCGACGACCCGGAGCGCCACGCGACAGCGCTGCGCCTCGCGATGCGCGAGGATTGA
PROTEIN sequence
Length: 303
VPRLVVIVGATGTGKSDLSLSLAEGLAREGHAAEIVNADAMQLYRGMDIGTAKLAPGERRGIPHHLLDVLDPAEEASVADYQALARAAIEDVEARGNVPVLVGGSGLYVSAVVQDFRFPGTDADVRARLEAELEGGGPGILYRRLLELDPGAATAIGPHNGRRLVRALEVVEITGEPFGSGLPEDAAPWRQATILALRAPREELVRRLDERVVGMWAAGILDEVRGLGALGVTASRAIGYAQALAQLAGELDEQQAVEQTQSLTRRYARRQVGWFRRYDAHWLDFDDPERHATALRLAMRED*