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SCNpilot_expt_300_bf_scaffold_0_curated_41

Organism: scnpilot_dereplicated_Micrococcales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38
Location: comp(35865..36188)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, Cro/CI family id=7719178 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 108.0
  • Bit_score: 201
  • Evalue 5.30e-49
DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 107.0
  • Bit_score: 175
  • Evalue 9.80e-42
Transcriptional regulator, Cro/CI family {ECO:0000313|EMBL:CCE75931.1}; TaxID=1097677 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. nebraskensis NCPPB 2581.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 107.0
  • Bit_score: 175
  • Evalue 4.40e-41

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Taxonomy

Clavibacter michiganensis → Clavibacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 324
ATGGTTCTGGTACGTCAAGAAATCGGTGACGTTCTCCGTGACTTCCGTCTGCAGAAGGGCCGCACCCTTCGCCAGGTCGCCAGCAAGGCGAGCGTCGCGCTCGGCTACCTCAGCGAGGTGGAGCGCGGCCAGAAGGAGGCGAGCTCCGAGATCCTCGCGTCCGTCGCCGATGCGCTCGACACCCCCATCTCGGTGATCATGCGCGAGGTGGGCGACCGTCTCGCCGTCATCGAGGGCCTCGAGTCCATCTCCCGCAGCACCGTGCCCGACACGCTGCCCGACGAGCTCGTCGCCGAGTTCGACGGCGACCTCGTCTCGCGGTAG
PROTEIN sequence
Length: 108
MVLVRQEIGDVLRDFRLQKGRTLRQVASKASVALGYLSEVERGQKEASSEILASVADALDTPISVIMREVGDRLAVIEGLESISRSTVPDTLPDELVAEFDGDLVSR*