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SCNpilot_expt_300_bf_scaffold_0_curated_45

Organism: scnpilot_dereplicated_Micrococcales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38
Location: comp(40272..41486)

Top 3 Functional Annotations

Value Algorithm Source
Efflux ABC transporter, permease component id=7719182 bin=CNBR_ACT species=Clavibacter michiganensis genus=Clavibacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 405.0
  • Bit_score: 772
  • Evalue 2.80e-220
Cell division protein FtsX {ECO:0000313|EMBL:KGJ76476.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 410.0
  • Bit_score: 433
  • Evalue 3.30e-118
hypothetical protein; K02004 putative ABC transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 57.9
  • Coverage: 404.0
  • Bit_score: 426
  • Evalue 7.00e-117

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Taxonomy

Cryobacterium roopkundense → Cryobacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1215
GTGACGGGCTTCATCGGTGCCCTCGTCGAGGCGTGGGCCGAGATCCGCATCCACCGCACGCGCGTGCTCCTGAGCCTCATCGGCGTCGCCGTGGCCGTCGCGGCGCTCACGTCGGTGGTCGGCCTGGGTGCGATAACGCAGCAGGCGACGACCGAGAGCTACGAGCGGCAGTCGGGCCGCCCCGCGACGCTCTTCGTGAGCGCGTACAACGTGGCGACGGGCCAGACGCCCGACGCCAAGACCTTCTCCACGGCGTTCACGGAGGTGACCGAGCGCTACTCCGTCGACTGGACGACGCGCTCGACGTACACGCAGGTGAGCGTCGACTTCGTGGACGGCGTGACGCCCGTCGACACGACGCTCGTCGACGTCGGCTACGGCACCATGCACCGCGTGCAGCTCGTGCAGGGCAGCTGGTTCGTCGACGGGGACGACCAGCGGCTCGCCCCCGCCCTCGTGGTGAACGAGACGGTGTGGAAGAAGCTCGGCTCGCCCGACCTCCGCACCCACCCCACGGTGACCCTGCGGGGCTCGAGCGATGTGACCGCGGTCATCGTGGGCGTCGCGCCCGACATGCCCTACGCGCAGGACTACCCGACGATGTTCATGCTCTACGACTCGTTCGTCGGCATCGCTACTCCGCAGCAGGTGCAACAGATGTACCCGCAGTTCGAGGCATGGGTTCCGGTCGACATCTCCCAGGAGCTCACCGAGCTCATCAAGCGCGACATCGCGGGCGAGCTGGGGGAGGGCTGGCAGGTCGACGTGAGCCGCCAGGACTACCTCGTGTACCAGGGCGACGACCCGCTGCTGCCGATCAAGCTGCTCGTGGGCGGCGTCGCGGTGCTCGTGCTCCTGCTCGGGGCGCTCGGGCTCGTGAACATCTCGCTCGTGACCGTGCGCCAGCGCATCCGCGAGATCGGTATCCGGCGCAGCTTCGGCGCGACCGCGGGCCGCGTGTTCTTCGCCGTCATGATGGAGAGCGTCGTCGCGGCCGCCGCGGCGGGGGTCGTCGGCGTCTTCATCGCGGTGGTCGTCGTGAAGAACCCGACGGTCGTCGAGTTCATCGCGCCCGGCATCAGCGACATCCCCGCCTTCCCGCTCGAGGCGGCCCTCATCGGTCTCGGCTCGGCGACCTTCGTGGGCGCCCTCGCGGGGCTGCTGCCCGCGCTCGTGGCCGTGCGCGTGAAGGTCATCGACGCGATCCGCTACTAG
PROTEIN sequence
Length: 405
VTGFIGALVEAWAEIRIHRTRVLLSLIGVAVAVAALTSVVGLGAITQQATTESYERQSGRPATLFVSAYNVATGQTPDAKTFSTAFTEVTERYSVDWTTRSTYTQVSVDFVDGVTPVDTTLVDVGYGTMHRVQLVQGSWFVDGDDQRLAPALVVNETVWKKLGSPDLRTHPTVTLRGSSDVTAVIVGVAPDMPYAQDYPTMFMLYDSFVGIATPQQVQQMYPQFEAWVPVDISQELTELIKRDIAGELGEGWQVDVSRQDYLVYQGDDPLLPIKLLVGGVAVLVLLLGALGLVNISLVTVRQRIREIGIRRSFGATAGRVFFAVMMESVVAAAAAGVVGVFIAVVVVKNPTVVEFIAPGISDIPAFPLEAALIGLGSATFVGALAGLLPALVAVRVKVIDAIRY*