ggKbase home page

SCNpilot_expt_300_bf_scaffold_0_curated_48

Organism: scnpilot_dereplicated_Micrococcales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38
Location: 43302..44501

Top 3 Functional Annotations

Value Algorithm Source
Low temperature requirement A id=7719185 bin=CNBR_ACT species=Frankia sp. CN3 genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 400.0
  • Bit_score: 787
  • Evalue 6.40e-225
Low temperature requirement protein A {ECO:0000313|EMBL:KGH46809.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.0
  • Coverage: 387.0
  • Bit_score: 367
  • Evalue 2.90e-98
low temperature protein similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 384.0
  • Bit_score: 334
  • Evalue 4.70e-89

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Modestobacter sp. KNN45-2b → Modestobacter → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1200
ATGCCGACATCCCCCGTGCGCAGCTTCCTGCGCCTGCGCACCACCGACGAGTCGCACCGCGTCACGACGCTCGAGCTGTTCTTCGACCTCGTGTTCGTCTTCGCGTTCACACAGGTCACGGGCTTCATGGCGGAGTCGCACAGCGCGGTCGGGGTGCTCCAGGGGCTCGTCATCCTCGCGATGCTGTGGTGGTCGTGGACGTCGTACAGCTGGCTCGCCAACCAGACCCGCATCGACGAGGGCATCGCGCGCGTCGGGTTCTGCGCGGCGATCGTGCTGCTGTTCATCGTGTCTCTCGCGATTCCCGAGGCCTTCGACGACCGCGAGGGCGGGCTGTTCGCCCCCGTCGTGCTCGTCGTCGCCTACCTGTTCATCAGGCTCATCCACGGCTTCGTCTACCTCGCGGCGGCCGGCGACGACGCGGGCCTGCGGCGCCAGCTCTACCGCTCGGTCTGGCCCATGGCGCTCGGCGTCGCGCTCATGCTCGCGGGCACGCTCGTGGGCGGCGGATGGCAGGTGTGGTTCTGGCTCGCGGGCATCGGCCTCGACGTGATGTTCACCTACTTCCTGTCGGTGGGCGGCGGATGGCGCGTGCAGTCCGCCGCGCACTGGGCGGAGCGGTACGGGCTCATCGTCATGCTCGCGCTCGGGGAGTCGATAGTCGAGATCGGCTTCGGCGCCGCGCAGGAACCGCTGGGCGCGGGCATCCTCGCGGCCTCGGTGCTCGCCGTCGGCCTGTCGATAGCGCTGTGGTGGATGTACTTCGACATCGTGTCGATCGGCGCGGAGAAGTACCTCGCGAAGCTGGGCGGCACGGATCGCGCCGACCTCGCGAGCGACGCCTACACCTACCTGCACTTCACTCTCGTGGCGGGCGTGATCATCTCGGCGCTGGGTGTCGAGAACGTGCTCGCCCACCTGGACTCCGAGCACGGGCTCGAGCTGTTCGGCTCGGTCGCCCTGTTCGGCGGCACGTCGCTCTACCTCGCGGGGCACGCCTTCTTCTGGCGGCGCGTGGCGCACCGCTGGCTGCCGTCACGGCTCATCGGGGCAGCGGTGCTGCTCGCCCTCATCCCCGTCGGGGCCGCCCTGCCGTCGCTCGCGGCGATCGCGCTCGCGACGGGGGTGACGGCGGCCGTGGTCGCGGTCGAGACCCTCACCTACTCGCGCGAGCGCGCCGCGGTGCGGTCGGGCGGGTAG
PROTEIN sequence
Length: 400
MPTSPVRSFLRLRTTDESHRVTTLELFFDLVFVFAFTQVTGFMAESHSAVGVLQGLVILAMLWWSWTSYSWLANQTRIDEGIARVGFCAAIVLLFIVSLAIPEAFDDREGGLFAPVVLVVAYLFIRLIHGFVYLAAAGDDAGLRRQLYRSVWPMALGVALMLAGTLVGGGWQVWFWLAGIGLDVMFTYFLSVGGGWRVQSAAHWAERYGLIVMLALGESIVEIGFGAAQEPLGAGILAASVLAVGLSIALWWMYFDIVSIGAEKYLAKLGGTDRADLASDAYTYLHFTLVAGVIISALGVENVLAHLDSEHGLELFGSVALFGGTSLYLAGHAFFWRRVAHRWLPSRLIGAAVLLALIPVGAALPSLAAIALATGVTAAVVAVETLTYSRERAAVRSGG*