ggKbase home page

SCNpilot_expt_300_bf_scaffold_0_curated_52

Organism: scnpilot_dereplicated_Micrococcales_4

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38
Location: comp(45994..47670)

Top 3 Functional Annotations

Value Algorithm Source
metallo-beta-lactamase family hydrolase; K12574 ribonuclease J [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 558.0
  • Bit_score: 932
  • Evalue 5.40e-269
Putative uncharacterized protein id=7719189 bin=CNBR_ACT species=unknown genus=unknown taxon_order=unknown taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 559.0
  • Bit_score: 1097
  • Evalue 0.0
Uncharacterized protein {ECO:0000313|EMBL:EAR25190.1}; TaxID=312284 species="Bacteria; Actinobacteria.;" source="marine actinobacterium PHSC20C1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 558.0
  • Bit_score: 991
  • Evalue 4.40e-286

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine actinobacterium PHSC20C1 → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1677
ATGCCTGTTACGGTCTTCGACCCACCAGCCCTCGCACCCGGAACCCTCCGTGTCACGCCCCTCGGCGGACTCGGCGAGATCGGGCGCAACATGACCATCTACGAGATCGACGGCAAGCTCCTCGTCGTCGACTGCGGGGTGCTCTTCCCCGAGGAGACGCAGCCCGGTGTGGACCTGATCCTCCCGGACTTCAGCCCCATCCGCGACCGTCTCGACGACGTGCTCGGCATCGTGCTCACGCACGGCCACGAGGACCACATCGGCGCGGTGCCCTACCTCCTCAAGCTGAGGCAGGACATCCCGCTCATCGGGTCGACGCTCACGCTCGCGCTCATCGAGGCGAAGCTCAAGGAGCACCGCATCCAGCCCTACACGCACACCGTCGCGGAGGGGCAGACCGAGCAGGTCGGACCGTTCGGGCTCGAGTTCGTCGCGGTCAACCACTCGATCCCCGACGCGCTCGCCGTCGCGATCAAGACCTCGGCGGGCGTCGTGCTGCACACGGGCGACTTCAAGATGGACCAGCTGCCGCTCGACGACCGCATCACCGACCTGCGCGCGTTCGCGCGCCTGGGCGAGGCCGGCGTCGACCTCTTCCTGCCCGACTCCACGAACGCCGACGTGCCCGGCTTCACGCCCAACGAGCGCGACATCGGCCCCGTCATCGAGGCCGTCATCGCCAAGGCGCCGCGCCGGGTCGTCGTCGCGAGCTTCTCGAGCCACGTGCACCGCGTGCAGCAGGTGCTCGACGCCGCCGTCGCCAACGACCGCAAGGTCGTGCTCATGGGCCGCTCGATGGTGCGCAACATGGGCATCGCGGCGGACCTCGGGTTCCTCAAGGTCCCCGACGGCGTGCTCCTCGACGCCAAGAAGGCCGCAGACCTGCCGGACAACCGCCTCGTCTACATGTCGACGGGGAGCCAGGGCGAGCCCATGGCCGTGCTCGCGCGCATGGCCAACATGGAGCACCAGATCGAGGTCGGCAAGGGTGACACGGTCATCCTCGCGTCGTCGCTCATCCCCGGCAACGAGAACGCCGTCTACCGCGTCATCAACGGGCTCATGAAGCTCGGCGCGACGGTCGTGCACAAGGGCAACGCGAAGGTGCACGTCTCGGGCCACGCCGCGGCGGGCGAGCTGCTCTACTGCTACAACATCCTCAAGCCGCGCAACGTGCTGCCCGTGCACGGCGAGCAGCGCCACCTCGTCGCCAACGCGAACCTCGCGATCGCGACGGGCGTGCCCGAGGAGAACACCTTCATCGGCGAGAACGGCACGGTCATCGACCTCCGCGCAGGCGAGGCGCGCGTCGTCGGCCAGCTCGACCTCGGCTACGTGTACGTCGACGGGTCGAGCGTGGGAGAGATCACCGACGCCGACCTCAAGGACCGCCGCATCCTCGCCGAGGAGGGGTTCATCTCGATCTTCGTCGCGATCGACCCGCAGACCGGCAAGGTCATCGTGGGCCCGGAGATCCAGGCGAGGGGCTTCGCGGAGGACGAGAACGTCTTCGACACGGTCAAGCCGCAGATCCTCAAGGCGCTCACCGACGCCGCCGAGAACGGCACGCGCGACACGCATGCGTTCGCGCAGGTGGTGCGCCGCACGGTCGGACGCTGGGTGAACACCCAGCACCGCCGCCGGCCGATGATCGTGCCCGTGGTCATCGAGGCCTAG
PROTEIN sequence
Length: 559
MPVTVFDPPALAPGTLRVTPLGGLGEIGRNMTIYEIDGKLLVVDCGVLFPEETQPGVDLILPDFSPIRDRLDDVLGIVLTHGHEDHIGAVPYLLKLRQDIPLIGSTLTLALIEAKLKEHRIQPYTHTVAEGQTEQVGPFGLEFVAVNHSIPDALAVAIKTSAGVVLHTGDFKMDQLPLDDRITDLRAFARLGEAGVDLFLPDSTNADVPGFTPNERDIGPVIEAVIAKAPRRVVVASFSSHVHRVQQVLDAAVANDRKVVLMGRSMVRNMGIAADLGFLKVPDGVLLDAKKAADLPDNRLVYMSTGSQGEPMAVLARMANMEHQIEVGKGDTVILASSLIPGNENAVYRVINGLMKLGATVVHKGNAKVHVSGHAAAGELLYCYNILKPRNVLPVHGEQRHLVANANLAIATGVPEENTFIGENGTVIDLRAGEARVVGQLDLGYVYVDGSSVGEITDADLKDRRILAEEGFISIFVAIDPQTGKVIVGPEIQARGFAEDENVFDTVKPQILKALTDAAENGTRDTHAFAQVVRRTVGRWVNTQHRRRPMIVPVVIEA*