ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

scnpilot_expt_750_p_scaffold_469_curated_17

Organism: scnpilot_dereplicated_Micrococcales_2

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: comp(15092..18085)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036A8F26 similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 975.0
  • Bit_score: 1016
  • Evalue 1.60e-293
Uncharacterized protein {ECO:0000313|EMBL:KHK98845.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 898.0
  • Bit_score: 1060
  • Evalue 0.0
TrwC relaxase similarity KEGG
DB: KEGG
  • Identity: 35.8
  • Coverage: 999.99
  • Bit_score: 471
  • Evalue 6.10e-130

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2994
GTGCGCCAGGCGGTCGCCTACGCCCTCGAGGGGGTGTGCGACGCCGCCCGCGGACACCGGCCTCTCGGCGTCGAGCACGCGGTCGGCTATAGCGACGCCCGCAACCTCACCGTCACGCGCTTCACCGTCACCGGGGAGGGCATCGGCCAGGACCGACTGGACGCCCGCGCCTTGGCCCGCTGGATTGACGGGGCTGACCCGGAAAGTGGGCGGCCGCGGGGCCGTGTGCTGACCAGCCCCGATGCGGATCTGTTCCTGGACGCGACGATGAACATGCCCAAGTCCTACAGCCTCGCTGTGCTGCTCGCCCCGGAACTGCGTGACGAACTGGAGGCGCTGCAGGACCGCATCCGGGATCGGACCCTGGCGACCTGGCAGCGGGAGCTGAACGCGCGACGCGGCGCCGGAGGAGTAGTCCGGGAGCCGATCGCGCGCCTCGAGGTGGTCGAGCTGCAGCACGAGCGATCGCGTGCCCTCGACCCGCACATCCACCGACATCTGTGGCTGGGCGTGAAGGTGCTCGGAGAGGATGGCAAGTGGTCCAACGTCGACTCGCGGGTGGCGATGAAGCTGCACACCGTCGTCAATGCCGAGGGCGATCTCGCTTCTCGCACCGACCCCGCCTGGATCGCGGCGCTCGCCTGTCACGGCTACACCCTCGATGCGGACGGAGAGATCGCTGAGCTAGCGCACCTGGTGCGACCTCTGTCGCGCCGCTCCAACCAGATCGAAGCGAACCGGGCGCTCCGGCTGGCGCAATGGCGGCAAGCCCACCCCGGACAGCACCCGGACCACGCCGTGCTCGCCGCGATCGACCGCTGGGCGTGGGCGCAGCATCGGCCCGGCAAGCCCGAGGAGGTGGACGAGGGCGTCTGGCAGGATCTCATCCGTTCCGAGATCGCTGCCCTGGACGCGACCGCGCTCGGCCGGCGCGACAGCGCGGCGGTGACGGCGACGAAGGTGGGGACGCTGGACCGCGACCTACTCGCGGCAATGGCGGTCGCCGACGCAGATCGTCGCTCCGCCGGGTGCGGGGGACGGTTCAGCCGGTACGACGTGCGCGCCGGAGCGATCCGCGCGCTCGCCGCCTCGGGCGTCGTCGCCGACCGCGACCTGCTCGAGGAAGTCGTCGAGGACGTGACCGGGCGTGCTCTGAAGGAGCACGTCGTCGACTTCCTCGACGGCGAGGCTCGCGTGCCGTCCCATGTGAAGCAGTTGATGTCGCTGCGGACCGCGCAGGACAAGCTCGACCTCGCCGAACGCCTCGACCGGCTGAACCAGCCCGGCCACGACGTGCCTGCAGAGGCGATCGGCCAGCTCGCCGCGGAAGTCCTCGACGATGACACCGCGTTGGATCCGGGACAGACCGCCGCCGCATCGGCGGTAGCGGGCACCAACCGTCTGGTGACCGTCACCGGGCCGGCCGGCACCGGCAAGACCACACTCCTGAAAGTTGCGCGCCGAGCGCTGCGAGGTCAACGGCGGTCAATGATCGTGGTCGCTCCCACCCGGAGGGCGGCTACCGTCGCGGGCCGCGACATCGGAACCGCCGCCTCGAGCCTGCACGCGCTGCTGGTCGACCACGGCTACCGGTTCGCCGAGGACGCCGCCGGGTGGACGGTCTGGACTCGACTGACTCCCGGCGACGTCGATCCGGCGACCGGGTCTGTCTACCGTGGCCCGCGTCGCTACCCGATCCAGGCTGGGGATCGAATCGTCGTCGACGAGGCTGGGATGGTCGATCTTCAGGTCGCCAACGCGCTCGCTCAACTTGCCCTCGATACCGGGGCGGGGATCGCAATGGTCGGCGACCACCTCCAGGCCCTCCCGGTCGGGCACTCCGGCGCGATGGCCGCAGCGCAGCGCCGCTCCGGGAGCGTCGTCGAGCTCACCGTCGTCCACCGCTTTCACGAGCGCGACTACGCGGCACTCAGCCTGCGGCTGCGCGACCCGGCCGATCACGCCGAGGCGGTCGCGGTCGCCCAGGAACTGGCCGTCCGCGGGCACGTCGAGATGGTCAGCAGCGAGCACGAGGCCCGCGAGCGGATGGTGAGCGCCTGGCTAGACCATGCGGTCCGCGGGGAGCGGATCGCCCTGGTGACGGCGACCAACGCCGAGGCGCAGCAGATCAACGACCGCATCCAACAGGAGCGGCTCGATCGCGGCCAGCTCGACTCCGGACGGGTCGCTGTGGGGCAGCACGGCCAGTCCATGTTGGTCGGCGACGTCGTCCAGACTCGCCGGAACGACATCGACACCGGCGTCGACAACCGCGCTAACTGGACCATCACCCGCATCCGCCAAGGCGCCGTCGAGCTCGCCTCAGTCGGTGACTCTGGCGACCGTCGCACGGTCTCCCGCGACTACGCCGCCGAGCACATGCACCTCGCCTATGCCTCCACCGTGCATGGCATCCAGGGCGAGACCGTCCACGCCGCCTACACCGGTCCCGGCGTAGACGCGGCCGGCCTCTACGTCGGTATGACGCGCGGCCGCGTTGCCAACACGGCGCTCACCATCGCCCAGAGCGCCGAGGGCGCGATCGAGCAACTCGCTGACACCATGCTCCGCGGGCTCCCTGAGGTCACGCTGGGCGACGCGCGCCGCTCCGCCCGAAAGGAACTCGACCGCGCTGCCCGCGACCCCCACCGCCAGCGCATTGCTGCTCGGTCCGCCGAGACGGACGCACGCGCCCGCGCGCTCCGCGACGCGCTGCGCGAGAACGACGCGCGCGCCGCATCGCTGATCGCGGTCGGCCACGCCCGGCCCGAAGCGGCCCGCCTCGCCGACGTGCTCGATGAGACGGCCGCAGACCGGGACCGCCTCCTCGAAGCCCTTGCCGCCGAGCGCGCTCGGAGGGATGCGCTCATGCGCGACGTGGACGTCGACGCCGTCGCAGAACGCGATCGCGTATCCGCCCCGACAGCTGCTTGGGAGCCCGATCCGTTCGCGCCGCCAGCACCCGACCACCATCGGCCCGGACTCGGGCTGTAG
PROTEIN sequence
Length: 998
VRQAVAYALEGVCDAARGHRPLGVEHAVGYSDARNLTVTRFTVTGEGIGQDRLDARALARWIDGADPESGRPRGRVLTSPDADLFLDATMNMPKSYSLAVLLAPELRDELEALQDRIRDRTLATWQRELNARRGAGGVVREPIARLEVVELQHERSRALDPHIHRHLWLGVKVLGEDGKWSNVDSRVAMKLHTVVNAEGDLASRTDPAWIAALACHGYTLDADGEIAELAHLVRPLSRRSNQIEANRALRLAQWRQAHPGQHPDHAVLAAIDRWAWAQHRPGKPEEVDEGVWQDLIRSEIAALDATALGRRDSAAVTATKVGTLDRDLLAAMAVADADRRSAGCGGRFSRYDVRAGAIRALAASGVVADRDLLEEVVEDVTGRALKEHVVDFLDGEARVPSHVKQLMSLRTAQDKLDLAERLDRLNQPGHDVPAEAIGQLAAEVLDDDTALDPGQTAAASAVAGTNRLVTVTGPAGTGKTTLLKVARRALRGQRRSMIVVAPTRRAATVAGRDIGTAASSLHALLVDHGYRFAEDAAGWTVWTRLTPGDVDPATGSVYRGPRRYPIQAGDRIVVDEAGMVDLQVANALAQLALDTGAGIAMVGDHLQALPVGHSGAMAAAQRRSGSVVELTVVHRFHERDYAALSLRLRDPADHAEAVAVAQELAVRGHVEMVSSEHEARERMVSAWLDHAVRGERIALVTATNAEAQQINDRIQQERLDRGQLDSGRVAVGQHGQSMLVGDVVQTRRNDIDTGVDNRANWTITRIRQGAVELASVGDSGDRRTVSRDYAAEHMHLAYASTVHGIQGETVHAAYTGPGVDAAGLYVGMTRGRVANTALTIAQSAEGAIEQLADTMLRGLPEVTLGDARRSARKELDRAARDPHRQRIAARSAETDARARALRDALRENDARAASLIAVGHARPEAARLADVLDETAADRDRLLEALAAERARRDALMRDVDVDAVAERDRVSAPTAAWEPDPFAPPAPDHHRPGLGL*