ggKbase home page

scnpilot_expt_750_p_scaffold_174_curated_12

Organism: scnpilot_dereplicated_Micrococcales_2

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: 10201..10779

Top 3 Functional Annotations

Value Algorithm Source
16S rRNA-processing protein RimM n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B6203D similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 179.0
  • Bit_score: 267
  • Evalue 1.40e-68
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=1358026 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia aquatica ATCC 14665.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 188.0
  • Bit_score: 251
  • Evalue 1.10e-63
16S rRNA-processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 64.3
  • Coverage: 196.0
  • Bit_score: 247
  • Evalue 4.70e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Leifsonia aquatica → Leifsonia → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 579
GTGGCCAGGCCCGAGCGTCCGCCGGGGACCGAGCTGCGCGTCGGCCGGCTGACGAAGGCGCACGGGCTCAAGGGCGCGCTGAAGCTCGATCTGTACACCGACGACCCGGCGCGGCGCTTCGTGCCCGGCGCGACGTTCGCGCTCCAGGTCCCGGACTCGAGCCCCTGGCACGGCCAGCGGCTCGAGCTCGTCGAGCTGAAGTGGTTCAACGGGGTGCCCGTCGGGTTCTTCGCGGGCGTGACCGATCGCACCGCGGCGGAGGGCCTCGTCAAGGCGGTGCTCTGGGTCGAGGTCGGGGAGGAGCCCCAGGAGGAGGACGCCTGGTACTACCACCAGCTCGTCGGCCTCCGCGTGCTGCGCGACGGCGTCGAGCTCGGCCGGGTGGTCCGGGTCGACGAGCTCCCGGCGCAGGACCTGCTCGCGGTCGAGACCGCGCACGGCGAGGTGCTCGTCCCGTTCGTCAAGGCGATCGTGACCGAGGTCGACGTCGCGGGCGGCACGGTCACCGTGGACCCGCCCGGCGGCCTCTTCGAGGAGCCGGGGGAGTCCGGGGCCGAGGCGGCCGGCGAGACCCCCTGA
PROTEIN sequence
Length: 193
VARPERPPGTELRVGRLTKAHGLKGALKLDLYTDDPARRFVPGATFALQVPDSSPWHGQRLELVELKWFNGVPVGFFAGVTDRTAAEGLVKAVLWVEVGEEPQEEDAWYYHQLVGLRVLRDGVELGRVVRVDELPAQDLLAVETAHGEVLVPFVKAIVTEVDVAGGTVTVDPPGGLFEEPGESGAEAAGETP*