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SCNpilot_expt_1000_bf_scaffold_328_curated_19

Organism: scnpilot_dereplicated_Micrococcales_3

near complete RP 52 / 55 MC: 6 BSCG 51 / 51 ASCG 14 / 38
Location: 20680..21804

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LacI family n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FR71_ISOV2 similarity UNIREF
DB: UNIREF100
  • Identity: 48.5
  • Coverage: 344.0
  • Bit_score: 292
  • Evalue 6.10e-76
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 344.0
  • Bit_score: 292
  • Evalue 1.90e-76
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AEG42931.1}; TaxID=743718 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isoptericola variabilis (strain 225).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.5
  • Coverage: 344.0
  • Bit_score: 292
  • Evalue 8.50e-76

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Taxonomy

Isoptericola variabilis → Isoptericola → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1125
ATGGGTGTCACGATGCGCGACGTCGCGCGCGCCGCAGGCGTATCCCCCATGACGGTGTCGAACGTCCTGAACGGTCGCCCCAGCGTCTCCCCGTCGCTTCGCGAGCAGGTCCTTCGCGTCGTCGACGAGCTGGGGTACGAGCTCAGCCTCAATGCGCGCCAGCTCCGCGTCGGGCGCAGCGGCATGGTGGTGGCCGTCGCCCCTCGCATCTCCGACCCGTACTTCGGCTGGCTCGCCTCGGCCCTGGCCGCCGGGTTCCACCGAGCGGGCCTGCACCTCGTCGTCGAGGAGGCCGTGAGCACGTCGAGGGGTGAGCTCGGCGCACTGTCCGGAGCCCGACTACGCCGGTACGACGGCGTCGTCATCAGCGCCGTCGACCTCGACTTCGCCGTGATGGAACGGATGAGCGTCGACGTCCCCGTCGTCTTCCTCGCCGAGCATGCCGTTCCGCAGCGCTTCGACCACATCCAGATGCCCAACGAGGCGGGGTCCAGGATGGCGGTCGCGGAGCTCTTCGACACCGGTGCGCGCCGGGTCATGATGCTCGGCGGCTCGCGCGCCCCCTCCACCCACGGGATGGCCGAGGCGCGCACGGCCGGCTGGGAGCAGGCCCACGCCGACGCCGGGGCTCCCGTCGACGACGGGCTCGTCGTCCCGCTCGTGACCTACGACCCGCTCGAGGCCTGCGCCGCGGTCGTGCGCCACGTCGGGGCCGATCCCTCGATCGACGCCGTGTTCGCCGCCACCGACACCGCCGCGATCGGCGCCCTGCGGGCAGCCCACCAGCTCGGGCTCCGCGTGCCCGAGGACCTCCAGGTGATCGGCTTCGACAACCTGAAGATCGACGAGAGCCTCGCCCCGGCCCTGTCCTCGATCGACCCGGGCGTTCCGTGGATCGTCGACAACGCCGTGCGCATCCTCTCCGAGCGGATCGAGGACCCGGACTCGGCCCAGCGGCCGGAACACCTCGTCGCACCGCCGACCCTCGTCCGGCGCGAGAGCACCCGCCGCCCCGCGCCGGGTCCTCGCGGACAGGCGACCAGCTCGGCGCCCGCGGTGTCTTCCGCGAGCGCCGAGCCGATCGGCCGGCGGGCTCAGGCCAGGTCGAGCTCGACCGTGGCGTAG
PROTEIN sequence
Length: 375
MGVTMRDVARAAGVSPMTVSNVLNGRPSVSPSLREQVLRVVDELGYELSLNARQLRVGRSGMVVAVAPRISDPYFGWLASALAAGFHRAGLHLVVEEAVSTSRGELGALSGARLRRYDGVVISAVDLDFAVMERMSVDVPVVFLAEHAVPQRFDHIQMPNEAGSRMAVAELFDTGARRVMMLGGSRAPSTHGMAEARTAGWEQAHADAGAPVDDGLVVPLVTYDPLEACAAVVRHVGADPSIDAVFAATDTAAIGALRAAHQLGLRVPEDLQVIGFDNLKIDESLAPALSSIDPGVPWIVDNAVRILSERIEDPDSAQRPEHLVAPPTLVRRESTRRPAPGPRGQATSSAPAVSSASAEPIGRRAQARSSSTVA*