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SCNpilot_expt_1000_bf_scaffold_575_curated_7

Organism: scnpilot_dereplicated_Micrococcales_3

near complete RP 52 / 55 MC: 6 BSCG 51 / 51 ASCG 14 / 38
Location: comp(2078..3016)

Top 3 Functional Annotations

Value Algorithm Source
integrase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5D7C9 similarity UNIREF
DB: UNIREF100
  • Identity: 31.1
  • Coverage: 296.0
  • Bit_score: 102
  • Evalue 7.40e-19
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.0
  • Coverage: 320.0
  • Bit_score: 91
  • Evalue 1.80e-15
tyrosine recombinase XerD; K04763 integrase/recombinase XerD similarity KEGG
DB: KEGG
  • Identity: 29.6
  • Coverage: 314.0
  • Bit_score: 84
  • Evalue 5.00e-14

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Taxonomy

Thermaerobacter subterraneus → Thermaerobacter → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 939
ATGACGACCGATCCTCTCGCGCGCCTGCTCGACGGGCTCGACCCCACCACCGCCGAGCTGCTCGAGCGGCATCTCGCGCCGATGCGTCAGCGCACCGGCACCAACCACGCCGGCTACCTGACCCAGTGGCGGACCTGGCTCGCCGGCCTCGACGCCGCTCCCGCGCTGCTCGAGGCGCGCGAGCGGCACGTGCAGGCGTGGGTGTCGGCGATGCTCGACAGCGGAGCCGCGGCCACGACCGTCTCGGCCAAGATGACGTCTCTGCGGGCCCTGTACGGACGTGCGCTGCGCGAGGGTCTCGTCGCCGAGGACCCGACTCGGTGGGTGCGCGACCCAGTCCGCGCGCGCCGCTCAACCCGGCTCTGGCTCGACGACACGCAGTCGGTGGAGCTGCTCGACGCCGCCGACGCCCACGCCGACCCCGCGCTGCGCGCGGCGATCTACCTGTGGCTGATGGTCGGATGCCGGCCCGCCGAGCCGCTGCACTGCGACGTCACCCACCTCGGCAGCTACGACGGGCAGACTACGCTCTATCTCCCGCAGCGCAAGGGCGGCGACGCTTCGACCGTGGCGCTCTCGCGCCTGACCGGGCTGGCCGTGCACGCGGCCGCCGGCGAGCGCACCAGCGGCCCGCTCCTGCTCGGCCCGGATGGTCAGCGCGCGCGCCTCGACCCGATGCGCCGGGCGATGCGTCGGCTGATCCGCGAGCACACCGGGCTCTCGCGGCGTCTCCAGCCCTACGGGTTGCGGCTGACGTTCGCCACGGCCGCGCTCGATGCCGGCGTCCACGAGCGCGAGCTCGCGGCGTACATGGGCCAGCGGACCACAGCCACGATCCCCGTCTACGATCAGACCCGTGGCCGCGTGAGCATCGAGCGCGCACCCACCCACGCCGTCGAGCACCGCCTCGGCCGCGACCCCGAGACGGCCGCGGCCTGA
PROTEIN sequence
Length: 313
MTTDPLARLLDGLDPTTAELLERHLAPMRQRTGTNHAGYLTQWRTWLAGLDAAPALLEARERHVQAWVSAMLDSGAAATTVSAKMTSLRALYGRALREGLVAEDPTRWVRDPVRARRSTRLWLDDTQSVELLDAADAHADPALRAAIYLWLMVGCRPAEPLHCDVTHLGSYDGQTTLYLPQRKGGDASTVALSRLTGLAVHAAAGERTSGPLLLGPDGQRARLDPMRRAMRRLIREHTGLSRRLQPYGLRLTFATAALDAGVHERELAAYMGQRTTATIPVYDQTRGRVSIERAPTHAVEHRLGRDPETAAA*