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SCNpilot_expt_1000_bf_scaffold_670_curated_30

Organism: scnpilot_dereplicated_Micrococcales_3

near complete RP 52 / 55 MC: 6 BSCG 51 / 51 ASCG 14 / 38
Location: 26904..27485

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BF36_SANKS similarity UNIREF
DB: UNIREF100
  • Identity: 48.2
  • Coverage: 164.0
  • Bit_score: 147
  • Evalue 1.60e-32
RNA polymerase sigma factor SigL {ECO:0000313|EMBL:KJQ52972.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 159.0
  • Bit_score: 150
  • Evalue 2.70e-33
sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 164.0
  • Bit_score: 147
  • Evalue 5.10e-33

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Taxonomy

Microbacterium sp. SA39 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 582
GTGACCGCGGACGTCGTCGTGCTCGAGTCGCACCGGGAGCTCAGGCCGGCACGGGGCGGGGGCGACGAGACCGTCGTCGCCGACCGCGTCGAGGCCGCGCTGCGCGCCAGCTCCTCCGACCTGCTCGGCTACCTGCTGCGGCGGACGGACCGGGACGACGCGCCCGACGTGCTCTCGGAGGTGTTCGTCACGGTCTGGCGCCGACGCGACGTCGTGCCGGAGGACCCGACGCGCGCGCGGATGTGGCTGTTCGGCGTCGCGCGCCGCACGCTGGCGAACCACCGGCGCTCGCGCTCGCGCGCCTCGGCGCTGACGGAGCGACTCCAGACGGCTCTCACCGACGCGCTGCCGGCGCTGCGGGAGGCGGGCTTCCCCGGGAGCGAGTCGGGCGAGCGGGCACGCGAGGTCCGCGCGGCCGTCCAGGCGCTGCCGCCGCGCCAGCGTGAGCTCGTGGCGCTCGTGCACTGGGACGGGTTCTCGCTCACGGAGGCCGCCGAGATCGCCGGCATCAGGGCCTCGACCGCCCGCTCGCACTACGCCCGGGCCCGCGAGCGCCTGGCCGAGCTGCTCGCCGCGAGCTGA
PROTEIN sequence
Length: 194
VTADVVVLESHRELRPARGGGDETVVADRVEAALRASSSDLLGYLLRRTDRDDAPDVLSEVFVTVWRRRDVVPEDPTRARMWLFGVARRTLANHRRSRSRASALTERLQTALTDALPALREAGFPGSESGERAREVRAAVQALPPRQRELVALVHWDGFSLTEAAEIAGIRASTARSHYARARERLAELLAAS*