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SCNpilot_cont_300_bf_scaffold_601_curated_28

Organism: scnpilot_dereplicated_Nitrobacter_1

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 11 / 38
Location: 27387..27923

Top 3 Functional Annotations

Value Algorithm Source
2',5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] similarity KEGG
DB: KEGG
  • Identity: 91.5
  • Coverage: 177.0
  • Bit_score: 328
  • Evalue 1.10e-87
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 177.0
  • Bit_score: 328
  • Evalue 5.10e-87
2',5' RNA ligase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQR0_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 91.5
  • Coverage: 177.0
  • Bit_score: 328
  • Evalue 3.60e-87

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGCCGCGTTTGTTCACCGGGCTGGAGATACCGCCCGACGTCTGCCGCATACTGTCCGATCTGCGCGGCGGTCTGCCCGGCGCCCGCTGGATCGATCCCGAAAATTACCATCTCACGCTGCGCTTCATCGGCGATATCGACGGCGCATCCGCCAACGAGATCGCGTCGGTGCTGCTGCGGGTCAACCGCAAACCATTCGAGGTGACGCTGCGCGGGCTGTCCAGTTTCGGCGGCAAGAAACCGCGCGCCGTCGTCGCTTCGGTGGAGCCGAGCGGGCCGCTGGTCGAGTTGCAGGCCGAACTCGAACGGCTGATCCAGCGCTGCGGGCTCGATCCCGAGAGCCGCAAGTTCACGCCTCACGTGACGCTGGCTCGGCTGCGCGACGCATCCAACCATGACGTCGCGAACTATCTGTCGGTGCGGGGCTATTTTCCGTCCAAAGTCTTCACCGCCGAGCGTTTCGTGCTGTTCTCCTCGCGCGCCTCGGTCGGCGGCGGACCTTATGTGGTGGAGGATTCCTACGCGCTCAGCCCGTAA
PROTEIN sequence
Length: 179
MPRLFTGLEIPPDVCRILSDLRGGLPGARWIDPENYHLTLRFIGDIDGASANEIASVLLRVNRKPFEVTLRGLSSFGGKKPRAVVASVEPSGPLVELQAELERLIQRCGLDPESRKFTPHVTLARLRDASNHDVANYLSVRGYFPSKVFTAERFVLFSSRASVGGGPYVVEDSYALSP*