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SCNpilot_cont_300_bf_scaffold_651_curated_13

Organism: scnpilot_dereplicated_Nitrobacter_1

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 11 / 38
Location: 7230..7535

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein, trbC n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QFG6_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 101.0
  • Bit_score: 176
  • Evalue 1.70e-41
Bradyrhizobium elkanii strain UASWS1015 Contig150, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53110.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 101.0
  • Bit_score: 193
  • Evalue 1.10e-46
conjugal transfer protein, trbC; K03197 type IV secretion system protein VirB2 similarity KEGG
DB: KEGG
  • Identity: 90.1
  • Coverage: 101.0
  • Bit_score: 176
  • Evalue 5.40e-42

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Taxonomy

Bradyrhizobium elkanii → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 306
ATGAAGAGATTGCTTTCACGCGCGCCATTGGCCGGAGCGCTTCTGTTACAGACCATCACGAAGGCCGCGGCGCAGTCGAGTGGCGGGACGCTGCAACCCGTTCAATCGACGCTGACGCAATTGGTCTCAGCGCTCACGGGGCCCATTGCGACAGCATTGGCGACGCTCGCCGTGATCGCCTGCGGATTCTTCGCCTGGTCCGGCCGGCTGACCTGGGGCATCGCCGGCAGCGTCATTTTCGGAATCGTGCTGGTGTTCGGCTCGGCGCAGATCGTCCAGTTCTTCCAGTCAGCGGTCGGGCAATGA
PROTEIN sequence
Length: 102
MKRLLSRAPLAGALLLQTITKAAAQSSGGTLQPVQSTLTQLVSALTGPIATALATLAVIACGFFAWSGRLTWGIAGSVIFGIVLVFGSAQIVQFFQSAVGQ*