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SCNpilot_cont_300_bf_scaffold_651_curated_15

Organism: scnpilot_dereplicated_Nitrobacter_1

near complete RP 48 / 55 MC: 2 BSCG 47 / 51 MC: 3 ASCG 11 / 38
Location: 7839..10250

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion protein VirB4 n=2 Tax=Oligotropha carboxidovorans RepID=B6JK43_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 803.0
  • Bit_score: 1522
  • Evalue 0.0
Bradyrhizobium elkanii strain UASWS1015 Contig150, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53112.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 803.0
  • Bit_score: 1584
  • Evalue 0.0
type IV secretion/conjugal transfer ATPase; K03199 type IV secretion system protein VirB4 similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 803.0
  • Bit_score: 1522
  • Evalue 0.0

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Taxonomy

Bradyrhizobium elkanii → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2412
ATGGTTGCGCGTGCCCTGCTTGACGAGTTGACCTTCGGCGCCGTTTCACGGCGCGAGCGTCCTGTCGCCTCCCATGTTCCCTATACGCGCCATGTCGACGACCACATCATCAAGACCCGCGATGGCCTTGTCATGACGGTCCTCAAGCTCGATGGTTATTCGTTCGAGACGTCCGACATGAGCGAAGTCAACTCGCGCCTGCTGGGACGCAACGACGTCATTCGGACTCTTGCCAATTCGAGATTCGCGCTCGTATCCCACATCATCCGACGGGAGGTCCAGCCAAGGATCGACTCGACCTTCGACAATCCGTTGTGCCGCGAGCTTGACGAGCGCTACGACGCAGCGCTGTCGCAGCGGCGCATGTTCGTCAACGATATCTACCTGACCATCGTGCGGCGGCCCTTGCAGGGTCAGGCCGGCACCTTCGATCTCATGCTGACGAAGTTGCTCGGCCGCAAGGACGAGGCCGGCGAGTCGGTCGCGATGCAGACCGCACTGACCGAGCTGCGTGATGCGGCGACCGCGGTGCGCGAAACTCTCGCCGGCTATGGCGCCCGCCAGCTCGGTGTGGTGCGGCGCGATGGCGTCTGGTTCTCCGAGCCGCTCGAGTTCCTGGTGCAGATTCTTGATGGCGGCATCCCGCGCCCGATGCATCTGCCACGCCTGGACATCGCCGATGCGCTGTCAATGAAACGCATCTTCTTCGGTCGTAACGCCATCGAAATTCGCGGCGCGGGCCCCGAGGATACCCGCTTCGGCGCCATGGTCTCGATCCGGGAATACCCGGCGCAGACCGGTCCCGGCTCGTTCGACAACCTGCTGCGCGTGCCGCACGAATTCATTGCCACACAGAGCTTCGCCATCGTCGACCGGCCCGAGGCTGCCAAGCAGATCGATCGGGTGTCGCGCCAAGTCGACATGTCGGATGAGGCCGGATCGATTGTCGCGGAGCATCTCGATGATGCCCGCGATGAACTGCTGGCCTCGGAAGCGATCTATGGCGAGCACCACATGACGGTGATGTGCCTCGGCCGCAACTTGTCGGAGGTCGGCGCCGCCGTCACGGTGGTCGGCGCAGCGCTCACGGACCGCTCGGTGATCTGGACGCGCGAGGACCTCAATTGCGAGCCGGCGTTCTGGGCGCAGCTTCCCGGCAATTTTGCCTATATCGCCCGCAAGGGCGTGATCTCATCGAAGAACTTTGCCGGCTTTGCCTCACTGCACAATTATCCGAGCGGTCGGCCGACCGGCAATCACTGGGGGCCGGCGATCTCCGTGTTCGAGACGACGTCGCAGACCGCCTATTATTACAACCATCATGTCCGCGACATCGGCAACTTCACCGTCGTCGGCCCGACCGGGTCGGGCAAGACGGTGTTTCTGTCCTTCATCGCGGCGCAGACGCAGCGCATCCAGCCACGGCCGAAGCTGCTGTTCGTCGACAAGGATCGCGGCGCCGAGATCTTCATCCGGGCGCTCGGCGGGCAATATGAGACGCTCGTCCCCGGCGAGCCGACCGGCTTCAATCCACTGTCGCTCCCGGACACGGCGCCCAACCGGGAATTTCTCTATCAGCTGTTCGCCTTCATGTTGCGGCCTGCGAATGGCGCGGATCTGACCGCGTCCGAAGAGCAGGTCATCCGCAACGCCATCGCGGCGGCGCTCACCGGCGGTCCAGCGGGTCGGACGCTGAAAGCCTTCTCCACCTTGCTGCGCGGCCGCATCCGGGCGGGGGAGGGGGACCTGCTGGCGCGACTCGAAAGCTGGATGCGGCCCGATCAGCGTGGCTGGCTGTTCAACAACGACGAGGATCAGTTCTCGTTGTCGAGCGTGTTCGGATTCGACATGACGCGTGTGCTCGACGATCCGGTGATCCGCACTGCGGCGCTGATGTACATTTTCCACAGGACAGAAGAGCTCCTGACCGGTGACCCGGTGATGATTTTCCTCGATGAAGGCTGGCGTCTGCTCGACGATGACGTATTCGCCTTCTTCATCCGCGACAAGCTCAAGACCATTCGCAAGCAGAACGGCATCGTCGGCTTCGGCACGCAATCGGCCGCCGACATCGTGCGCTCGAAAGCCTCGAACACGCTAATCGAACAGACCAGCACCAACATCTTCTTTCCGAATCCGAAAGCCGATGACGAAAGCTACAAGCAGGCTTTTCGTTTGTCGGGACGGGAAGTCGCCTGGATTCGCGGCACCGTGCCGGAGAGCCGTTCCTTCCTGATCAAGCATGGCCGAGACAGCGTGGTGGCGAAGCTCAATCTCGCCAGCATGCCGGACCTGATCAAGGTGCTGTCCGGGCGCACCGAGACGGTCGCCGAGCTCGATGCGCTGCGGGCGCGGGTCGGCAACGACCCCGCCGTGTGGTTGCCGCTCTTCATGGGCAGGAGCGAGGCATGA
PROTEIN sequence
Length: 804
MVARALLDELTFGAVSRRERPVASHVPYTRHVDDHIIKTRDGLVMTVLKLDGYSFETSDMSEVNSRLLGRNDVIRTLANSRFALVSHIIRREVQPRIDSTFDNPLCRELDERYDAALSQRRMFVNDIYLTIVRRPLQGQAGTFDLMLTKLLGRKDEAGESVAMQTALTELRDAATAVRETLAGYGARQLGVVRRDGVWFSEPLEFLVQILDGGIPRPMHLPRLDIADALSMKRIFFGRNAIEIRGAGPEDTRFGAMVSIREYPAQTGPGSFDNLLRVPHEFIATQSFAIVDRPEAAKQIDRVSRQVDMSDEAGSIVAEHLDDARDELLASEAIYGEHHMTVMCLGRNLSEVGAAVTVVGAALTDRSVIWTREDLNCEPAFWAQLPGNFAYIARKGVISSKNFAGFASLHNYPSGRPTGNHWGPAISVFETTSQTAYYYNHHVRDIGNFTVVGPTGSGKTVFLSFIAAQTQRIQPRPKLLFVDKDRGAEIFIRALGGQYETLVPGEPTGFNPLSLPDTAPNREFLYQLFAFMLRPANGADLTASEEQVIRNAIAAALTGGPAGRTLKAFSTLLRGRIRAGEGDLLARLESWMRPDQRGWLFNNDEDQFSLSSVFGFDMTRVLDDPVIRTAALMYIFHRTEELLTGDPVMIFLDEGWRLLDDDVFAFFIRDKLKTIRKQNGIVGFGTQSAADIVRSKASNTLIEQTSTNIFFPNPKADDESYKQAFRLSGREVAWIRGTVPESRSFLIKHGRDSVVAKLNLASMPDLIKVLSGRTETVAELDALRARVGNDPAVWLPLFMGRSEA*