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SCNpilot_cont_300_bf_scaffold_1073_curated

Search features with annotation key words

Displaying items 31-42 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_300_bf_scaffold_1073_curated_31
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(28066..29865)
DNA (1800bp) protein (600aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQI1_NITHX
diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:ABE61516.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_1073_curated_32
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30042..30347
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQI2_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61515.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_1073_curated_33
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30466..31131)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQI3_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61514.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_1073_curated_34
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(31268..31453)
DNA (186bp) protein (62aa)
50S ribosomal protein L32 n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=RL32_NITWN
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32
50S ribosomal protein L32 {ECO:0000255|HAMAP-Rule:MF_00340}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_300_bf_scaffold_1073_curated_35
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31600..32307)
DNA (708bp) protein (236aa)
mtgA; monofunctional biosynthetic peptidoglycan transglycosylase; K03814 monofunctional biosynthetic peptidoglycan transglycosylase [EC:2.4.1.-]
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000255|HAMAP-Rule:MF_00766}; Short=Monofunctional TGase {ECO:0000255|HAMAP-Rule:MF_00766};; EC=2.4.2.- {ECO:0000255|HAMAP-Rule:MF_00766};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Monofunctional biosynthetic peptidoglycan transglycosylase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=MTGA_NITHX rbh
SCNpilot_cont_300_bf_scaffold_1073_curated_36
unknown

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comp(32307..32414)
DNA (108bp) protein (36aa)

This feature has no annotations

SCNpilot_cont_300_bf_scaffold_1073_curated_37
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32584..33510
DNA (927bp) protein (309aa)
polyprenyl synthetase; K00795 farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
Farnesyl-diphosphate synthase {ECO:0000313|EMBL:ABE61511.1}; EC=2.5.1.10 {ECO:0000313|EMBL:ABE61511.1};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Farnesyl-diphosphate synthase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQI6_NITHX
SCNpilot_cont_300_bf_scaffold_1073_curated_38
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33520..34212
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQI7_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61510.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_300_bf_scaffold_1073_curated_39
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(34325..36244)
DNA (1920bp) protein (640aa)
Preprotein translocase subunit SecG n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HDL5_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig172, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49907.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein rbh
SCNpilot_cont_300_bf_scaffold_1073_curated_40
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36416..36853
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SQ59_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA05582.1}; Flags: Precursor;; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_300_bf_scaffold_1073_curated_41
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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36903..39062
DNA (2160bp) protein (720aa)
TonB-dependent receptor n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20XX9_RHOPB
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
TonB-dependent receptor {ECO:0000313|EMBL:ABD90007.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_300_bf_scaffold_1073_curated_42
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39235..39342
DNA (108bp) protein (36aa)
Sodium/proton antiporter, CPA1 family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQI8_NITHX
Na+/H+ antiporter; K03316 monovalent cation:H+ antiporter, CPA1 family
Sodium/proton antiporter, CPA1 family {ECO:0000313|EMBL:ABE61509.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Displaying items 31-42 of 42 in total

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