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SCNpilot_cont_300_bf_scaffold_2214_curated_23

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: comp(20095..21501)

Top 3 Functional Annotations

Value Algorithm Source
isopropylmalate isomerase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] similarity KEGG
DB: KEGG
  • Identity: 95.3
  • Coverage: 468.0
  • Bit_score: 914
  • Evalue 1.70e-263
3-isopropylmalate dehydratase large subunit {ECO:0000255|HAMAP-Rule:MF_01026}; EC=4.2.1.33 {ECO:0000255|HAMAP-Rule:MF_01026};; Alpha-IPM isomerase {ECO:0000255|HAMAP-Rule:MF_01026}; Short=IPMI {ECO:0000255|HAMAP-Rule:MF_01026};; Isopropylmalate isomerase {ECO:0000255|HAMAP-Rule:MF_01026}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 468.0
  • Bit_score: 914
  • Evalue 7.50e-263
3-isopropylmalate dehydratase large subunit n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=LEUC_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 468.0
  • Bit_score: 914
  • Evalue 5.30e-263
  • rbh

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Taxonomy

Nitrobacter hamburgensis → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1407
ATGTCCAAACCGACCACTCTCTATGACAAGATCTGGAACGATCATCTGGTCCACGAAGCCGAGGACGGCACCTGCCTGCTCTATATCGACCGCCACCTCGTTCATGAGGTGACCTCGCCGCAGGCGTTCGAGGGTCTGCGCGCCGCCGGGCGCAAGGTCCACGCGCCGCAGAAAACGCTCGCGGTGGTCGATCACAACGTGCCGACCACCGATCGCACCAAGCCCAATCCCGATCCGGAGAGCGCCGAGCAGATCGCCGCGCTGGCGCAGAATGCCAGGGAATTCGGCATCGAGTATTATAACGAGTTCGACAAGCGCCAGGGCATCGTCCACGTCATCGGCCCCGAGCAGGGTTTCACCCTGCCCGGAACCACCATCGTCTGCGGCGACAGCCACACCTCGACGCATGGCGCGTTCGGCGCGCTCGCGCATGGCATCGGCACCTCGGAGGTCGAGCATGTGCTGGCGACGCAAACGCTGATTCAGAAGAAGGCGAAGAACATGCGCGCCATCGTCGACGGCAAGTTGCCGGACGGCGTCACCGCCAAGGACATCATCCTCGCCATCATTGGAGAAATAGGCACCGCGGGCGGCACCGGTTACGTGCTGGAATACGCCGGCGAGGCAATCCGCGCGCTGAGCATGGAAGGCCGCATGACGGTCTGCAACATGTCGATCGAAGGCGGCGCGCGCGCCGGCCTCGTCGCGCCTGACGAGAAAGCCTACGCATTCCTGAAAGGCCGTCCCAAGGCGCCGAACGGCGCCGATTGGGATGCCGCGATGCGCTACTGGGAAAACTTGCGCAGCGACGACGGCGCGCATTTCGATCACGAGATTCGGCTTGACGCCGCCAGGCTGCCGCCGATCGTGACCTGGGGAACTTCGCCGGAAGACGTCGTCTCGGTCACCGGCAAGGTGCCGAATCCCGCCGACATCGAGGACGAGGCGAAGCGACTGTCCAAGGAACGAGCGCTGCACTATATGGGACTGACGCCCGGCACGAAAATCACCGACATCCGGGTCGACCGTGTGTTCATCGGCTCATGCACCAACGGCCGCATCGAGGATTTGCGCGCGGCGGCGAAGATCGCTGACGGCAGGACGGTGAACGGCAATATCAACGCCATGGTCGTGCCGGGCTCCGGCATCGTCAAGGAACAGGCGGAAGCCGAAGGTCTCGACAAGATTTTCATCAAGGCGGGATTCGAATGGCGCGAGCCGGGCTGCTCGATGTGCCTTGCGATGAATCCCGACAAGCTGAAACCGGAGGAGCGCTGCGCCTCGACCTCGAATCGCAATTTCGAGGGACGGCAGGGTTTCAAGGGCCGCACCCATCTGGTGTCGCCCGCGATGGCGGCGGCGGCCGCGATCGCCGGGCATTTCGTCGACGTGCGCGAGTGGCATTGA
PROTEIN sequence
Length: 469
MSKPTTLYDKIWNDHLVHEAEDGTCLLYIDRHLVHEVTSPQAFEGLRAAGRKVHAPQKTLAVVDHNVPTTDRTKPNPDPESAEQIAALAQNAREFGIEYYNEFDKRQGIVHVIGPEQGFTLPGTTIVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQKKAKNMRAIVDGKLPDGVTAKDIILAIIGEIGTAGGTGYVLEYAGEAIRALSMEGRMTVCNMSIEGGARAGLVAPDEKAYAFLKGRPKAPNGADWDAAMRYWENLRSDDGAHFDHEIRLDAARLPPIVTWGTSPEDVVSVTGKVPNPADIEDEAKRLSKERALHYMGLTPGTKITDIRVDRVFIGSCTNGRIEDLRAAAKIADGRTVNGNINAMVVPGSGIVKEQAEAEGLDKIFIKAGFEWREPGCSMCLAMNPDKLKPEERCASTSNRNFEGRQGFKGRTHLVSPAMAAAAAIAGHFVDVREWH*