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SCNpilot_cont_300_bf_scaffold_2214_curated_26

Organism: scnpilot_dereplicated_Nitrobacter_2

near complete RP 42 / 55 MC: 1 BSCG 42 / 51 MC: 2 ASCG 11 / 38
Location: comp(23413..23934)

Top 3 Functional Annotations

Value Algorithm Source
Ribosome maturation factor RimM n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=RIMM_NITWN similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 173.0
  • Bit_score: 311
  • Evalue 5.80e-82
  • rbh
rimM; 16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 173.0
  • Bit_score: 311
  • Evalue 1.80e-82
Ribosome maturation factor RimM {ECO:0000255|HAMAP-Rule:MF_00014}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 173.0
  • Bit_score: 311
  • Evalue 8.20e-82

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Taxonomy

Nitrobacter winogradskyi → Nitrobacter → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 522
ATGACGGCGCGCGTCTGCGTGGCCCGGATCGGCGCCGCGCACGGCCTGCGCGGCGAGGTGCGGCTGTGGACGTTCACCGAAGACCCGATGTCGGTGACGCGCTACGGCCCGCTCTCGACAAAGGATGGCGCGCGACAGCTTGAGGTGGCGCACGCGCGCGCCGCCAGGGACCACCTCGTCGCAACGTTCACGGGCGTGACCACGCGCGAGGAGGCCGAGCGACTCAACGGTATTGAGCTTTACGTCGCGCGCGACAGACTGCCCGCGACGGACGAAGGCGAATACTATCACGCCGACCTGATCGGCCTCGCCGCGGTCGATGCGGCCGGCATGCCGCTCGGGACGGTGGCCGCCATCCATAACTTCGGCGCGGGCGATATCATCGAGATCGCCCCGCCGCAGGGCGCGACCCTGATGCTGCCGTTCACCGATGCCGTGGTGCCGGTCGTCGACATCGCCGGCGGGCGCGTGGTGATCGAGATGCCCGGCGAGATCGACGGCGACGAGCCGGATTCCATTTAG
PROTEIN sequence
Length: 174
MTARVCVARIGAAHGLRGEVRLWTFTEDPMSVTRYGPLSTKDGARQLEVAHARAARDHLVATFTGVTTREEAERLNGIELYVARDRLPATDEGEYYHADLIGLAAVDAAGMPLGTVAAIHNFGAGDIIEIAPPQGATLMLPFTDAVVPVVDIAGGRVVIEMPGEIDGDEPDSI*